5 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3GAJ4	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (1216 aa)
	A0A0D3GJK3	Uncharacterized protein. (601 aa)
	A0A0D3F1E7	Uncharacterized protein. (603 aa)
	A0A0D3ESL6	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (557 aa)
	A0A0D3FJ51	Uncharacterized protein. (73 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ESL6	A0A0D3F1E7	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.881
A0A0D3ESL6	A0A0D3GAJ4	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.817
A0A0D3ESL6	A0A0D3GJK3	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.881
A0A0D3F1E7	A0A0D3ESL6	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.881
A0A0D3F1E7	A0A0D3FJ51	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3F1E7	A0A0D3GAJ4	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.881
A0A0D3F1E7	A0A0D3GJK3	Uncharacterized protein.	Uncharacterized protein.	0.956
A0A0D3FJ51	A0A0D3F1E7	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3FJ51	A0A0D3GJK3	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3GAJ4	A0A0D3ESL6	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.817
A0A0D3GAJ4	A0A0D3F1E7	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.881
A0A0D3GAJ4	A0A0D3GJK3	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.881
A0A0D3GJK3	A0A0D3ESL6	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.881
A0A0D3GJK3	A0A0D3F1E7	Uncharacterized protein.	Uncharacterized protein.	0.956
A0A0D3GJK3	A0A0D3FJ51	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3GJK3	A0A0D3GAJ4	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.881