14 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3FJN1	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family. (224 aa)
	A0A0D3ETH6	Tr-type G domain-containing protein. (853 aa)
	A0A0D3ETV3	Tr-type G domain-containing protein. (841 aa)
	A0A0D3F2J8	Uncharacterized protein. (476 aa)
	A0A0D3F5Q7	Tr-type G domain-containing protein. (843 aa)
	A0A0D3FS13	Tr-type G domain-containing protein. (843 aa)
	A0A0D3G522	DUF1618 domain-containing protein. (536 aa)
	A0A0D3G524	DUF1618 domain-containing protein. (217 aa)
	A0A0D3G532	Uncharacterized protein. (1506 aa)
	A0A0D3G8S2	DUF1618 domain-containing protein. (434 aa)
	A0A0D3G8S3	Uncharacterized protein. (122 aa)
	A0A0D3GI13	Uncharacterized protein. (419 aa)
	A0A0D3GTH3	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family. (251 aa)
	A0A0D3GUM1	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family. (224 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ETH6	A0A0D3F2J8	Tr-type G domain-containing protein.	Uncharacterized protein.	0.945
A0A0D3ETH6	A0A0D3FJN1	Tr-type G domain-containing protein.	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.	0.534
A0A0D3ETH6	A0A0D3GI13	Tr-type G domain-containing protein.	Uncharacterized protein.	0.945
A0A0D3ETH6	A0A0D3GTH3	Tr-type G domain-containing protein.	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.	0.534
A0A0D3ETH6	A0A0D3GUM1	Tr-type G domain-containing protein.	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.	0.534
A0A0D3ETV3	A0A0D3F2J8	Tr-type G domain-containing protein.	Uncharacterized protein.	0.945
A0A0D3ETV3	A0A0D3FJN1	Tr-type G domain-containing protein.	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.	0.534
A0A0D3ETV3	A0A0D3GI13	Tr-type G domain-containing protein.	Uncharacterized protein.	0.945
A0A0D3ETV3	A0A0D3GTH3	Tr-type G domain-containing protein.	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.	0.534
A0A0D3ETV3	A0A0D3GUM1	Tr-type G domain-containing protein.	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.	0.534
A0A0D3F2J8	A0A0D3ETH6	Uncharacterized protein.	Tr-type G domain-containing protein.	0.945
A0A0D3F2J8	A0A0D3ETV3	Uncharacterized protein.	Tr-type G domain-containing protein.	0.945
A0A0D3F2J8	A0A0D3F5Q7	Uncharacterized protein.	Tr-type G domain-containing protein.	0.945
A0A0D3F2J8	A0A0D3FJN1	Uncharacterized protein.	EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.	0.999
A0A0D3F2J8	A0A0D3FS13	Uncharacterized protein.	Tr-type G domain-containing protein.	0.945
A0A0D3F2J8	A0A0D3G522	Uncharacterized protein.	DUF1618 domain-containing protein.	0.945
A0A0D3F2J8	A0A0D3G524	Uncharacterized protein.	DUF1618 domain-containing protein.	0.945
A0A0D3F2J8	A0A0D3G532	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A0D3F2J8	A0A0D3G8S2	Uncharacterized protein.	DUF1618 domain-containing protein.	0.945
A0A0D3F2J8	A0A0D3G8S3	Uncharacterized protein.	Uncharacterized protein.	0.945