18 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3FE99	Serine/threonine-protein phosphatase. (314 aa)
	A0A0D3EN93	Ubiquitin-like domain-containing protein. (155 aa)
	A0A0D3EPI6	LisH domain-containing protein. (1169 aa)
	A0A0D3EPK1	Uncharacterized protein. (350 aa)
	A0A0D3FP57	COR domain-containing protein. (1342 aa)
	A0A0D3FQE0	Serine/threonine-protein phosphatase. (363 aa)
	A0A0D3GE21	Uncharacterized protein. (226 aa)
	A0A0D3GEN8	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family. (846 aa)
	A0A0D3GFM5	Uncharacterized protein. (473 aa)
	A0A0D3GI30	Serine/threonine-protein phosphatase. (227 aa)
	A0A0D3GX23	TMEM189_B_dmain domain-containing protein. (68 aa)
	A0A0D3H3Y6	Uncharacterized protein. (261 aa)
	A0A0D3H444	Uncharacterized protein. (587 aa)
	A0A0D3HDJ6	Serine/threonine-protein phosphatase. (262 aa)
	A0A0D3HTT3	Uncharacterized protein. (303 aa)
	A0A0D3HTT4	PsaL domain-containing protein. (201 aa)
	A0A0D3F2H3	Serine/threonine-protein phosphatase. (307 aa)
	A0A0D3FB06	Uncharacterized protein. (204 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EN93	A0A0D3EPI6	Ubiquitin-like domain-containing protein.	LisH domain-containing protein.	0.663
A0A0D3EN93	A0A0D3F2H3	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3FE99	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3FP57	Ubiquitin-like domain-containing protein.	COR domain-containing protein.	0.804
A0A0D3EN93	A0A0D3FQE0	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3GEN8	Ubiquitin-like domain-containing protein.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family.	0.804
A0A0D3EN93	A0A0D3GFM5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.663
A0A0D3EN93	A0A0D3GI30	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3GX23	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.978
A0A0D3EN93	A0A0D3H444	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.663
A0A0D3EN93	A0A0D3HDJ6	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EPI6	A0A0D3EN93	LisH domain-containing protein.	Ubiquitin-like domain-containing protein.	0.663
A0A0D3EPI6	A0A0D3F2H3	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPI6	A0A0D3FE99	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPI6	A0A0D3FQE0	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPI6	A0A0D3GI30	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPI6	A0A0D3HDJ6	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPK1	A0A0D3F2H3	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.433
A0A0D3EPK1	A0A0D3FE99	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.433
A0A0D3EPK1	A0A0D3FQE0	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.433