11 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3EN93	Ubiquitin-like domain-containing protein. (155 aa)
	A0A0D3EPI6	LisH domain-containing protein. (1169 aa)
	A0A0D3EPK1	Uncharacterized protein. (350 aa)
	A0A0D3F2H3	Serine/threonine-protein phosphatase. (307 aa)
	A0A0D3FE99	Serine/threonine-protein phosphatase. (314 aa)
	A0A0D3FQE0	Serine/threonine-protein phosphatase. (363 aa)
	A0A0D3GFM5	Uncharacterized protein. (473 aa)
	A0A0D3GI30	Serine/threonine-protein phosphatase. (227 aa)
	A0A0D3GX23	TMEM189_B_dmain domain-containing protein. (68 aa)
	A0A0D3H444	Uncharacterized protein. (587 aa)
	A0A0D3HDJ6	Serine/threonine-protein phosphatase. (262 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EN93	A0A0D3EPI6	Ubiquitin-like domain-containing protein.	LisH domain-containing protein.	0.663
A0A0D3EN93	A0A0D3F2H3	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3FE99	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3FQE0	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3GFM5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.663
A0A0D3EN93	A0A0D3GI30	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3GX23	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.978
A0A0D3EN93	A0A0D3H444	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.663
A0A0D3EN93	A0A0D3HDJ6	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EPI6	A0A0D3EN93	LisH domain-containing protein.	Ubiquitin-like domain-containing protein.	0.663
A0A0D3EPI6	A0A0D3F2H3	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPI6	A0A0D3FE99	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPI6	A0A0D3FQE0	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPI6	A0A0D3GI30	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPI6	A0A0D3HDJ6	LisH domain-containing protein.	Serine/threonine-protein phosphatase.	0.928
A0A0D3EPK1	A0A0D3F2H3	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.433
A0A0D3EPK1	A0A0D3FE99	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.433
A0A0D3EPK1	A0A0D3FQE0	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.433
A0A0D3EPK1	A0A0D3GI30	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.433
A0A0D3EPK1	A0A0D3HDJ6	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.433