47 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3H2X2	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (249 aa)
	A0A0D3H444	Uncharacterized protein. (587 aa)
	A0A0D3H8V9	Uncharacterized protein. (338 aa)
	A0A0D3H9F9	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (249 aa)
	A0A0D3HAN7	Formin-like protein; Belongs to the formin-like family. (1188 aa)
	A0A0D3HDJ6	Serine/threonine-protein phosphatase. (262 aa)
	A0A0D3HX20	Uncharacterized protein. (89 aa)
	A0A0D3EN93	Ubiquitin-like domain-containing protein. (155 aa)
	A0A0D3EPF4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (355 aa)
	A0A0D3EPI6	LisH domain-containing protein. (1169 aa)
	A0A0D3EPK1	Uncharacterized protein. (350 aa)
	A0A0D3EQ76	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (192 aa)
	A0A0D3ER35	Protein kinase domain-containing protein. (175 aa)
	A0A0D3ETS7	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (539 aa)
	A0A0D3F1M4	UBP-type domain-containing protein. (466 aa)
	A0A0D3F2H3	Serine/threonine-protein phosphatase. (307 aa)
	A0A0D3F4I4	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	A0A0D3F661	WD_REPEATS_REGION domain-containing protein. (346 aa)
	A0A0D3F6W1	Prohibitin. (282 aa)
	A0A0D3F984	Protein kinase domain-containing protein. (206 aa)
	A0A0D3FBD9	Protein kinase domain-containing protein. (213 aa)
	A0A0D3FBJ7	Formin-like protein; Belongs to the formin-like family. (468 aa)
	A0A0D3FBJ9	Uncharacterized protein. (431 aa)
	A0A0D3FE99	Serine/threonine-protein phosphatase. (314 aa)
	A0A0D3FFN6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (290 aa)
	A0A0D3FJ67	Uncharacterized protein. (429 aa)
	A0A0D3FK30	Uncharacterized protein. (875 aa)
	A0A0D3FN81	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (415 aa)
	A0A0D3FQE0	Serine/threonine-protein phosphatase. (363 aa)
	A0A0D3FTD4	Formin-like protein; Belongs to the formin-like family. (1721 aa)
	A0A0D3FWQ5	Prohibitin. (293 aa)
	A0A0D3G0X9	Uncharacterized protein. (556 aa)
	A0A0D3G421	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (272 aa)
	A0A0D3G6J1	Uncharacterized protein. (269 aa)
	A0A0D3GAN1	Uncharacterized protein. (532 aa)
	A0A0D3GCU1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (394 aa)
	A0A0D3GCZ0	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (277 aa)
	A0A0D3GDK5	C2 tensin-type domain-containing protein. (536 aa)
	A0A0D3GDP6	Protein kinase domain-containing protein. (127 aa)
	A0A0D3GDP7	Protein kinase domain-containing protein. (272 aa)
	A0A0D3GFM5	Uncharacterized protein. (473 aa)
	A0A0D3GFP8	Uncharacterized protein. (1558 aa)
	A0A0D3GGM8	Uncharacterized protein. (528 aa)
	A0A0D3GI30	Serine/threonine-protein phosphatase. (227 aa)
	A0A0D3GS68	PI31_Prot_N domain-containing protein. (292 aa)
	A0A0D3GT37	Uncharacterized protein. (1031 aa)
	A0A0D3GYE0	Formin-like protein; Belongs to the formin-like family. (1004 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EN93	A0A0D3EPI6	Ubiquitin-like domain-containing protein.	LisH domain-containing protein.	0.663
A0A0D3EN93	A0A0D3F1M4	Ubiquitin-like domain-containing protein.	UBP-type domain-containing protein.	0.738
A0A0D3EN93	A0A0D3F2H3	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3FE99	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3FQE0	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3G0X9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.738
A0A0D3EN93	A0A0D3G421	Ubiquitin-like domain-containing protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.985
A0A0D3EN93	A0A0D3GAN1	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.988
A0A0D3EN93	A0A0D3GCZ0	Ubiquitin-like domain-containing protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.981
A0A0D3EN93	A0A0D3GFM5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.663
A0A0D3EN93	A0A0D3GFP8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.691
A0A0D3EN93	A0A0D3GI30	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EN93	A0A0D3GS68	Ubiquitin-like domain-containing protein.	PI31_Prot_N domain-containing protein.	0.773
A0A0D3EN93	A0A0D3H2X2	Ubiquitin-like domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.968
A0A0D3EN93	A0A0D3H444	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.663
A0A0D3EN93	A0A0D3H9F9	Ubiquitin-like domain-containing protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.968
A0A0D3EN93	A0A0D3HDJ6	Ubiquitin-like domain-containing protein.	Serine/threonine-protein phosphatase.	0.650
A0A0D3EPF4	A0A0D3EPI6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	LisH domain-containing protein.	0.422
A0A0D3EPF4	A0A0D3F2H3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Serine/threonine-protein phosphatase.	0.528
A0A0D3EPF4	A0A0D3F661	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.631