(96 nodes) Cytoprotection by HMOX1 network (Oryza barthii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3GBH5	HDAC_interact domain-containing protein. (861 aa)
	A0A0D3G9V4	Uncharacterized protein. (313 aa)
	A0A0D3GVV1	Uncharacterized protein. (452 aa)
	A0A0D3GVV3	Uncharacterized protein. (455 aa)
	A0A0D3GVV4	Uncharacterized protein. (450 aa)
	A0A0D3GX88	F-box domain-containing protein. (1601 aa)
	A0A0D3EIS3	HDAC_interact domain-containing protein. (1528 aa)
	A0A0D3EIS4	Uncharacterized protein. (137 aa)
	A0A0D3EN46	Uncharacterized protein. (513 aa)
	A0A0D3EN49	Uncharacterized protein. (402 aa)
	A0A0D3EN53	Uncharacterized protein. (458 aa)
	A0A0D3EPM0	Uncharacterized protein. (498 aa)
	A0A0D3EQ78	Uncharacterized protein. (534 aa)
	A0A0D3EQ83	Uncharacterized protein. (431 aa)
	A0A0D3ER58	Uncharacterized protein. (110 aa)
	A0A0D3EUV8	Methyltransf_11 domain-containing protein. (238 aa)
	A0A0D3EX41	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (111 aa)
	A0A0D3EZU1	DUF3456 domain-containing protein. (549 aa)
	A0A0D3F100	Thioredoxin domain-containing protein. (341 aa)
	A0A0D3F803	Uncharacterized protein. (371 aa)
	A0A0D3F8D7	DUF862 domain-containing protein. (222 aa)
	A0A0D3FBG3	Uncharacterized protein. (83 aa)
	A0A0D3FBZ1	DUF862 domain-containing protein. (252 aa)
	A0A0D3FCL4	DUF862 domain-containing protein. (245 aa)
	A0A0D3FD11	GH16 domain-containing protein. (312 aa)
	A0A0D3FF16	DUF862 domain-containing protein. (247 aa)
	A0A0D3FF30	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (363 aa)
	A0A0D3FHN7	Uncharacterized protein. (420 aa)
	A0A0D3FJC2	Uncharacterized protein. (167 aa)
	A0A0D3FJF8	Uncharacterized protein. (328 aa)
	A0A0D3FJG8	WW domain-containing protein. (690 aa)
	A0A0D3FL74	Uncharacterized protein. (121 aa)
	A0A0D3FLX1	Uncharacterized protein. (341 aa)
	A0A0D3FNB0	Uncharacterized protein. (241 aa)
	A0A0D3GZ66	Uncharacterized protein. (305 aa)
	A0A0D3GZ79	Uncharacterized protein. (68 aa)
	A0A0D3GZK8	Uncharacterized protein. (210 aa)
	A0A0D3H0H1	Uncharacterized protein. (1463 aa)
	A0A0D3H483	Uncharacterized protein. (558 aa)
	A0A0D3H4X4	Uncharacterized protein. (492 aa)
	A0A0D3H4X6	Uncharacterized protein. (447 aa)
	A0A0D3H4Y2	Uncharacterized protein. (476 aa)
	A0A0D3H641	Uncharacterized protein. (284 aa)
	A0A0D3H9H4	Uncharacterized protein. (474 aa)
	A0A0D3HCM6	Uncharacterized protein. (201 aa)
	A0A0D3HCV0	Uncharacterized protein. (889 aa)
	A0A0D3HCZ6	Uncharacterized protein. (476 aa)
	A0A0D3HD94	Uncharacterized protein. (332 aa)
	A0A0D3HE83	Uncharacterized protein. (459 aa)
	A0A0D3HEM0	DUF862 domain-containing protein. (296 aa)
	A0A0D3HFZ6	DUF862 domain-containing protein. (246 aa)
	A0A0D3HKK1	Uncharacterized protein. (448 aa)
	A0A0D3HMM9	Uncharacterized protein. (410 aa)
	A0A0D3HMR0	Uncharacterized protein. (115 aa)
	A0A0D3HMR2	Uncharacterized protein. (472 aa)
	A0A0D3HMR3	Uncharacterized protein. (150 aa)
	A0A0D3HMR4	Uncharacterized protein. (682 aa)
	A0A0D3HMS2	Uncharacterized protein. (205 aa)
	A0A0D3HMS3	Uncharacterized protein. (181 aa)
	A0A0D3HMS5	Uncharacterized protein. (690 aa)
	A0A0D3HMT2	Uncharacterized protein. (471 aa)
	A0A0D3HV06	Uncharacterized protein. (456 aa)
	A0A0D3HUG9	Uncharacterized protein. (276 aa)
	A0A0D3G9G7	Methyltransf_11 domain-containing protein. (233 aa)
	A0A0D3G829	Uncharacterized protein. (343 aa)
	A0A0D3G7R9	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (112 aa)
	A0A0D3G4X8	Uncharacterized protein. (451 aa)
	A0A0D3G484	Uncharacterized protein. (495 aa)
	A0A0D3G482	Uncharacterized protein. (508 aa)
	A0A0D3G2V5	Uncharacterized protein. (521 aa)
	A0A0D3G2V3	Uncharacterized protein. (534 aa)
	A0A0D3G2U9	Uncharacterized protein. (535 aa)
	A0A0D3G260	HDAC_interact domain-containing protein. (1479 aa)
	A0A0D3G0W9	Uncharacterized protein. (830 aa)
	A0A0D3FYM0	DUF862 domain-containing protein. (207 aa)
	A0A0D3FXP8	Uncharacterized protein. (267 aa)
	A0A0D3FW70	F-box domain-containing protein. (416 aa)
	A0A0D3FUX8	Uncharacterized protein. (197 aa)
	A0A0D3FT44	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (112 aa)
	A0A0D3FSK0	Uncharacterized protein. (223 aa)
	A0A0D3FS18	Uncharacterized protein. (145 aa)
	A0A0D3FPL9	Uncharacterized protein. (126 aa)
	A0A0D3GUU3	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (574 aa)
	A0A0D3GTP5	Uncharacterized protein. (144 aa)
	A0A0D3GT84	Uncharacterized protein. (81 aa)
	A0A0D3GPW0	Uncharacterized protein. (537 aa)
	A0A0D3GKR1	AAI domain-containing protein. (187 aa)
	A0A0D3GJT6	Uncharacterized protein. (209 aa)
	A0A0D3GJT2	Uncharacterized protein. (290 aa)
	A0A0D3GIF8	Uncharacterized protein. (226 aa)
	A0A0D3GHV5	DUF862 domain-containing protein. (214 aa)
	A0A0D3GGY6	Uncharacterized protein. (107 aa)
	A0A0D3GD40	Uncharacterized protein. (457 aa)
	A0A0D3GCP4	Uncharacterized protein. (154 aa)
	A0A0D3GC39	Uncharacterized protein. (299 aa)
	A0A0D3GBW1	DUF862 domain-containing protein. (217 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EIS3	A0A0D3FD11	HDAC_interact domain-containing protein.	GH16 domain-containing protein.	0.566
A0A0D3EIS3	A0A0D3FJG8	HDAC_interact domain-containing protein.	WW domain-containing protein.	0.562
A0A0D3EIS3	A0A0D3FL74	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.621
A0A0D3EIS3	A0A0D3GPW0	HDAC_interact domain-containing protein.	Uncharacterized protein.	0.621
A0A0D3EIS3	A0A0D3GUU3	HDAC_interact domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.566
A0A0D3EIS4	A0A0D3FD11	Uncharacterized protein.	GH16 domain-containing protein.	0.566
A0A0D3EIS4	A0A0D3FJG8	Uncharacterized protein.	WW domain-containing protein.	0.562
A0A0D3EIS4	A0A0D3FL74	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A0D3EIS4	A0A0D3GPW0	Uncharacterized protein.	Uncharacterized protein.	0.621
A0A0D3EIS4	A0A0D3GUU3	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.566
A0A0D3EN46	A0A0D3HMR3	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A0D3EN49	A0A0D3GC39	Uncharacterized protein.	Uncharacterized protein.	0.478
A0A0D3EPM0	A0A0D3HMR3	Uncharacterized protein.	Uncharacterized protein.	0.423
A0A0D3EQ78	A0A0D3GC39	Uncharacterized protein.	Uncharacterized protein.	0.418
A0A0D3EQ83	A0A0D3GC39	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A0D3ER58	A0A0D3EX41	Uncharacterized protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.902
A0A0D3ER58	A0A0D3FBG3	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A0D3ER58	A0A0D3FJC2	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A0D3ER58	A0A0D3FNB0	Uncharacterized protein.	Uncharacterized protein.	0.950
A0A0D3ER58	A0A0D3FPL9	Uncharacterized protein.	Uncharacterized protein.	0.999