23 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3FDH9	Uncharacterized protein. (427 aa)
	A0A0D3FKZ9	Uncharacterized protein; Belongs to the GST superfamily. (243 aa)
	A0A0D3FPX5	Uncharacterized protein. (231 aa)
	A0A0D3FTD1	Glutaredoxin domain-containing protein. (319 aa)
	A0A0D3GI13	Uncharacterized protein. (419 aa)
	A0A0D3GMD5	Uncharacterized protein. (174 aa)
	A0A0D3H2Y2	Uncharacterized protein; Belongs to the GST superfamily. (1281 aa)
	A0A0D3H9K4	Uncharacterized protein. (3673 aa)
	A0A0D3HCV7	Uncharacterized protein; Belongs to the GST superfamily. (279 aa)
	A0A0D3HET4	Uncharacterized protein; Belongs to the GST superfamily. (465 aa)
	A0A0D3HFV1	Uncharacterized protein; Belongs to the GST superfamily. (244 aa)
	A0A0D3HFV5	Uncharacterized protein; Belongs to the GST superfamily. (479 aa)
	A0A0D3HFV2	Uncharacterized protein; Belongs to the GST superfamily. (244 aa)
	A0A0D3HQU3	Uncharacterized protein; Belongs to the GST superfamily. (206 aa)
	A0A0D3HFW3	Uncharacterized protein; Belongs to the GST superfamily. (1250 aa)
	A0A0D3HFW0	Uncharacterized protein; Belongs to the GST superfamily. (1030 aa)
	A0A0D3ENV0	GST C-terminal domain-containing protein. (66 aa)
	A0A0D3ENV4	Uncharacterized protein; Belongs to the GST superfamily. (219 aa)
	A0A0D3ESR9	Uncharacterized protein; Belongs to the GST superfamily. (497 aa)
	A0A0D3EVL9	Uncharacterized protein. (409 aa)
	A0A0D3EYP1	Uncharacterized protein; Belongs to the GST superfamily. (923 aa)
	A0A0D3F2J8	Uncharacterized protein. (476 aa)
	A0A0D3FDH8	Uncharacterized protein. (1087 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ENV0	A0A0D3EVL9	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.502
A0A0D3ENV0	A0A0D3F2J8	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.631
A0A0D3ENV0	A0A0D3GI13	GST C-terminal domain-containing protein.	Uncharacterized protein.	0.631
A0A0D3ENV4	A0A0D3EVL9	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.502
A0A0D3ENV4	A0A0D3F2J8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.631
A0A0D3ENV4	A0A0D3GI13	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.631
A0A0D3ESR9	A0A0D3F2J8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.663
A0A0D3ESR9	A0A0D3GI13	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.663
A0A0D3EVL9	A0A0D3ENV0	Uncharacterized protein.	GST C-terminal domain-containing protein.	0.502
A0A0D3EVL9	A0A0D3ENV4	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.502
A0A0D3EVL9	A0A0D3F2J8	Uncharacterized protein.	Uncharacterized protein.	0.629
A0A0D3EVL9	A0A0D3FDH9	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A0D3EVL9	A0A0D3GI13	Uncharacterized protein.	Uncharacterized protein.	0.629
A0A0D3EVL9	A0A0D3H2Y2	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.502
A0A0D3EVL9	A0A0D3H9K4	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A0D3EYP1	A0A0D3F2J8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.663
A0A0D3EYP1	A0A0D3GI13	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.663
A0A0D3F2J8	A0A0D3ENV0	Uncharacterized protein.	GST C-terminal domain-containing protein.	0.631
A0A0D3F2J8	A0A0D3ENV4	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.631
A0A0D3F2J8	A0A0D3ESR9	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.663