68 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3F6U7	Uncharacterized protein. (247 aa)
	A0A0D3GJW3	Uncharacterized protein. (349 aa)
	A0A0D3GE21	Uncharacterized protein. (226 aa)
	A0A0D3GBR0	Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. (220 aa)
	A0A0D3GAQ7	Uncharacterized protein. (142 aa)
	A0A0D3G882	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (148 aa)
	A0A0D3G4X9	Uncharacterized protein. (101 aa)
	A0A0D3G3V6	Uncharacterized protein. (123 aa)
	A0A0D3G228	Uncharacterized protein. (248 aa)
	A0A0D3FY26	Uncharacterized protein. (118 aa)
	A0A0D3FVP1	Uncharacterized protein. (142 aa)
	A0A0D3FVM0	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (214 aa)
	A0A0D3FR25	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (153 aa)
	A0A0D3FPW5	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (378 aa)
	A0A0D3FPR1	Uncharacterized protein. (236 aa)
	A0A0D3FNS2	Uncharacterized protein. (214 aa)
	A0A0D3FMN6	ATP-synt_ab_N domain-containing protein. (243 aa)
	A0A0D3FM07	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (147 aa)
	A0A0D3FLW1	UBA domain-containing protein. (437 aa)
	A0A0D3FL05	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (362 aa)
	A0A0D3FHR1	Cytochrome c domain-containing protein. (188 aa)
	A0A0D3FGX3	Uncharacterized protein; Belongs to the ATPase B chain family. (211 aa)
	A0A0D3FGE3	Uncharacterized protein. (66 aa)
	A0A0D3FB06	Uncharacterized protein. (204 aa)
	A0A0D3FAI6	Uncharacterized protein. (209 aa)
	A0A0D3F7X4	Uncharacterized protein. (119 aa)
	A0A0D3F6N0	ATP-synt_ab domain-containing protein. (93 aa)
	A0A0D3HTT4	PsaL domain-containing protein. (201 aa)
	A0A0D3HTT3	Uncharacterized protein. (303 aa)
	A0A0D3HSY2	DUF1082 domain-containing protein. (108 aa)
	A0A0D3HS57	Uncharacterized protein. (207 aa)
	A0A0D3HRZ5	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (555 aa)
	A0A0D3HIX6	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (570 aa)
	A0A0D3HG91	Uncharacterized protein; Belongs to the reaction center PufL/M/PsbA/D family. (289 aa)
	A0A0D3HEE6	PsbP domain-containing protein. (277 aa)
	A0A0D3HDI0	Uncharacterized protein; Belongs to the complex I LYR family. (90 aa)
	A0A0D3H857	Uncharacterized protein. (141 aa)
	A0A0D3H628	J domain-containing protein. (188 aa)
	A0A0D3H3Y6	Uncharacterized protein. (261 aa)
	A0A0D3H383	Uncharacterized protein. (203 aa)
	A0A0D3GZC3	Uncharacterized protein. (308 aa)
	A0A0D3GYE6	Uncharacterized protein. (75 aa)
	A0A0D3GXT0	Uncharacterized protein; Belongs to the complex I LYR family. (90 aa)
	A0A0D3GXA2	Uncharacterized protein. (130 aa)
	A0A0D3GVU5	Uncharacterized protein. (95 aa)
	A0A0D3GVI1	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (139 aa)
	A0A0D3GV16	Uncharacterized protein. (282 aa)
	A0A0D3GSL1	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family. (124 aa)
	A0A0D3GSA9	Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (225 aa)
	A0A0D3GS39	Uncharacterized protein. (177 aa)
	A0A0D3GRM2	Uncharacterized protein. (358 aa)
	A0A0D3GQA1	Uncharacterized protein. (70 aa)
	A0A0D3GP78	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (235 aa)
	A0A0D3GMA7	Uncharacterized protein. (133 aa)
	A0A0D3GM99	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (379 aa)
	A0A0D3GM95	Uncharacterized protein. (139 aa)
	A0A0D3GM94	Uncharacterized protein. (137 aa)
	A0A0D3GM44	PsbP domain-containing protein. (254 aa)
	A0A0D3GLB2	Uncharacterized protein. (222 aa)
	A0A0D3GKT7	Uncharacterized protein. (94 aa)
	A0A0D3EMI5	Rhomboid domain-containing protein. (378 aa)
	A0A0D3EP96	Uncharacterized protein. (333 aa)
	A0A0D3EUM7	Uncharacterized protein. (124 aa)
	A0A0D3EWK0	Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (162 aa)
	A0A0D3EWS6	Uncharacterized protein. (268 aa)
	A0A0D3EYG3	Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family. (180 aa)
	A0A0D3EZI6	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (366 aa)
	A0A0D3F6A0	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (584 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EMI5	A0A0D3GJW3	Rhomboid domain-containing protein.	Uncharacterized protein.	0.422
A0A0D3EMI5	A0A0D3GMA7	Rhomboid domain-containing protein.	Uncharacterized protein.	0.428
A0A0D3EMI5	A0A0D3GYE6	Rhomboid domain-containing protein.	Uncharacterized protein.	0.422
A0A0D3EMI5	A0A0D3H857	Rhomboid domain-containing protein.	Uncharacterized protein.	0.410
A0A0D3EP96	A0A0D3EUM7	Uncharacterized protein.	Uncharacterized protein.	0.962
A0A0D3EP96	A0A0D3EWS6	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A0D3EP96	A0A0D3EYG3	Uncharacterized protein.	Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.	0.832
A0A0D3EP96	A0A0D3F6N0	Uncharacterized protein.	ATP-synt_ab domain-containing protein.	0.406
A0A0D3EP96	A0A0D3FAI6	Uncharacterized protein.	Uncharacterized protein.	0.478
A0A0D3EP96	A0A0D3FB06	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0D3EP96	A0A0D3FGE3	Uncharacterized protein.	Uncharacterized protein.	0.896
A0A0D3EP96	A0A0D3FGX3	Uncharacterized protein.	Uncharacterized protein; Belongs to the ATPase B chain family.	0.433
A0A0D3EP96	A0A0D3FL05	Uncharacterized protein.	Ferredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family.	0.405
A0A0D3EP96	A0A0D3FMN6	Uncharacterized protein.	ATP-synt_ab_N domain-containing protein.	0.406
A0A0D3EP96	A0A0D3FPR1	Uncharacterized protein.	Uncharacterized protein.	0.828
A0A0D3EP96	A0A0D3FVP1	Uncharacterized protein.	Uncharacterized protein.	0.564
A0A0D3EP96	A0A0D3G228	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A0D3EP96	A0A0D3G3V6	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A0D3EP96	A0A0D3G4X9	Uncharacterized protein.	Uncharacterized protein.	0.697
A0A0D3EP96	A0A0D3GAQ7	Uncharacterized protein.	Uncharacterized protein.	0.623