(39 nodes) Butanoate metabolism network (Oryza barthii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3EIT1	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (416 aa)
	A0A0D3EM66	Pyruvate carboxyltransferase domain-containing protein. (459 aa)
	A0A0D3ENF0	AMP-binding domain-containing protein. (248 aa)
	A0A0D3EQE5	Uncharacterized protein. (342 aa)
	A0A0D3EV13	Uncharacterized protein. (302 aa)
	A0A0D3EV89	DAO domain-containing protein. (416 aa)
	A0A0D3EXQ8	TF-B3 domain-containing protein. (446 aa)
	A0A0D3EZQ7	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (483 aa)
	A0A0D3EZW2	Uncharacterized protein. (305 aa)
	A0A0D3F1D5	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (529 aa)
	A0A0D3F5J2	Acetolactate synthase. (547 aa)
	A0A0D3F6H9	Uncharacterized protein. (293 aa)
	A0A0D3F7F9	Uncharacterized protein. (393 aa)
	A0A0D3FCL5	Uncharacterized protein. (73 aa)
	A0A0D3FD24	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (463 aa)
	A0A0D3FDG5	Uncharacterized protein. (1182 aa)
	A0A0D3FFX9	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (492 aa)
	A0A0D3FHI7	Uncharacterized protein. (571 aa)
	A0A0D3FHI8	Uncharacterized protein. (532 aa)
	A0A0D3FHN3	Uncharacterized protein. (312 aa)
	A0A0D3FJQ2	Elf4 domain-containing protein. (114 aa)
	A0A0D3FNC2	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (435 aa)
	A0A0D3FV57	Acetolactate synthase. (660 aa)
	A0A0D3FWD9	Uncharacterized protein. (234 aa)
	A0A0D3FWE5	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (829 aa)
	A0A0D3G0A5	Uncharacterized protein. (914 aa)
	A0A0D3G699	Elf4 domain-containing protein. (151 aa)
	A0A0D3GL36	Uncharacterized protein. (74 aa)
	A0A0D3GXF1	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (504 aa)
	A0A0D3GZI6	Elf4 domain-containing protein. (144 aa)
	A0A0D3GZI7	Elf4 domain-containing protein. (151 aa)
	A0A0D3H165	Glutamate decarboxylase; Belongs to the group II decarboxylase family. (495 aa)
	A0A0D3H2T5	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (423 aa)
	A0A0D3H464	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
	A0A0D3H915	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (476 aa)
	A0A0D3HHX1	Pyruvate carboxyltransferase domain-containing protein. (386 aa)
	A0A0D3HK78	Uncharacterized protein. (433 aa)
	A0A0D3HP30	Elf4 domain-containing protein. (117 aa)
	A0A0D3HR48	Pyruvate carboxyltransferase domain-containing protein. (408 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3EIT1	A0A0D3EM66	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Pyruvate carboxyltransferase domain-containing protein.	0.968
A0A0D3EIT1	A0A0D3ENF0	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	AMP-binding domain-containing protein.	0.647
A0A0D3EIT1	A0A0D3EV13	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.993
A0A0D3EIT1	A0A0D3EZW2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.647
A0A0D3EIT1	A0A0D3F1D5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.706
A0A0D3EIT1	A0A0D3FCL5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.647
A0A0D3EIT1	A0A0D3FD24	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.997
A0A0D3EIT1	A0A0D3FDG5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.647
A0A0D3EIT1	A0A0D3FHI7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.957
A0A0D3EIT1	A0A0D3FHI8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.957
A0A0D3EIT1	A0A0D3FHN3	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.931
A0A0D3EIT1	A0A0D3FJQ2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Elf4 domain-containing protein.	0.953
A0A0D3EIT1	A0A0D3G699	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Elf4 domain-containing protein.	0.953
A0A0D3EIT1	A0A0D3GZI6	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Elf4 domain-containing protein.	0.953
A0A0D3EIT1	A0A0D3GZI7	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Elf4 domain-containing protein.	0.953
A0A0D3EIT1	A0A0D3H2T5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.995
A0A0D3EIT1	A0A0D3H464	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.871
A0A0D3EIT1	A0A0D3H915	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.995
A0A0D3EIT1	A0A0D3HHX1	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Pyruvate carboxyltransferase domain-containing protein.	0.942
A0A0D3EIT1	A0A0D3HP30	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Elf4 domain-containing protein.	0.953