15 items (Oryza barthii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3FT65	Uncharacterized protein. (154 aa)
	A0A0D3ERM9	Uncharacterized protein. (275 aa)
	A0A0D3F0E8	Uncharacterized protein. (332 aa)
	A0A0D3F5E2	AAA_23 domain-containing protein. (1276 aa)
	A0A0D3FNV3	Uncharacterized protein. (274 aa)
	A0A0D3FR12	Uncharacterized protein. (355 aa)
	A0A0D3FT66	Uncharacterized protein. (326 aa)
	A0A0D3FZW9	Uncharacterized protein. (1253 aa)
	A0A0D3G036	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (682 aa)
	A0A0D3GEN6	Uncharacterized protein. (1873 aa)
	A0A0D3GN34	SAP domain-containing protein. (650 aa)
	A0A0D3GVF2	Uncharacterized protein. (640 aa)
	A0A0D3GWX4	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (589 aa)
	A0A0D3H918	Uncharacterized protein. (630 aa)
	A0A0D3HKF4	Uncharacterized protein. (887 aa)

Your Current Organism:

Oryza barthii

NCBI taxonomy Id: 65489
Other names: African wild rice, O. barthii, Oryza barthii A.Chev., Oryza breviligulata, Oryza breviligulata A.Chev. & Roehr.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D3ERM9	A0A0D3FR12	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3ERM9	A0A0D3FZW9	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A0D3ERM9	A0A0D3G036	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.994
A0A0D3ERM9	A0A0D3GN34	Uncharacterized protein.	SAP domain-containing protein.	0.937
A0A0D3ERM9	A0A0D3GVF2	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3ERM9	A0A0D3GWX4	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.994
A0A0D3ERM9	A0A0D3H918	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3F0E8	A0A0D3FR12	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3F0E8	A0A0D3FZW9	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A0D3F0E8	A0A0D3G036	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.994
A0A0D3F0E8	A0A0D3GN34	Uncharacterized protein.	SAP domain-containing protein.	0.937
A0A0D3F0E8	A0A0D3GVF2	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3F0E8	A0A0D3GWX4	Uncharacterized protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.994
A0A0D3F0E8	A0A0D3H918	Uncharacterized protein.	Uncharacterized protein.	0.822
A0A0D3F5E2	A0A0D3FR12	AAA_23 domain-containing protein.	Uncharacterized protein.	0.822
A0A0D3F5E2	A0A0D3FZW9	AAA_23 domain-containing protein.	Uncharacterized protein.	0.769
A0A0D3F5E2	A0A0D3G036	AAA_23 domain-containing protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.994
A0A0D3F5E2	A0A0D3GN34	AAA_23 domain-containing protein.	SAP domain-containing protein.	0.937
A0A0D3F5E2	A0A0D3GVF2	AAA_23 domain-containing protein.	Uncharacterized protein.	0.822
A0A0D3F5E2	A0A0D3GWX4	AAA_23 domain-containing protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.994