STRINGSTRING
ARN80153.1 ARN80153.1 ARN80158.1 ARN80158.1 ARN80159.1 ARN80159.1 ARN80372.1 ARN80372.1 ARN80373.1 ARN80373.1 ARN80374.1 ARN80374.1 ARN83362.1 ARN83362.1 ARN83401.1 ARN83401.1 ARN80576.1 ARN80576.1 gabD gabD ARN81886.1 ARN81886.1 ARN81887.1 ARN81887.1 ARN83636.1 ARN83636.1 ARN83646.1 ARN83646.1 ARN82101.1 ARN82101.1 B1812_14595 B1812_14595 ARN82382.1 ARN82382.1 ARN83724.1 ARN83724.1 ARN82401.1 ARN82401.1 ARN82403.1 ARN82403.1 ARN82404.1 ARN82404.1 ARN82629.1 ARN82629.1 ARN82887.1 ARN82887.1 ARN82927.1 ARN82927.1 ARN82979.1 ARN82979.1 ARN82980.1 ARN82980.1 ARN83852.1 ARN83852.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARN80153.1Poly(3-hydroxybutyrate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
ARN80158.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
ARN80159.1beta-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
ARN80372.1acetyl-CoA--acetoacetyl-CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
ARN80373.1succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
ARN80374.1Catalyzes the formation of acetoacetate from 3-hydroxybutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)
ARN83362.13-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
ARN83401.1Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (256 aa)
ARN80576.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
gabDSuccinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
ARN81886.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
ARN81887.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (728 aa)
ARN83636.1Poly-beta-hydroxybutyrate polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (586 aa)
ARN83646.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
ARN82101.1Succinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
B1812_14595Succinate dehydrogenase, hydrophobic membrane anchor protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (611 aa)
ARN82382.1Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
ARN83724.1acetoacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (651 aa)
ARN82401.1hydroxymethylglutaryl-CoA lyase; Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
ARN82403.13-hydroxyisobutyryl-CoA hydrolase; Catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
ARN82404.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
ARN82629.1Polyhydroxyalkanoate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
ARN82887.13-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
ARN82927.1Thiamine pyrophosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (571 aa)
ARN82979.1Acetolactate synthase 3 large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (590 aa)
ARN82980.1Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
ARN83852.1Class I poly(R)-hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (585 aa)
Your Current Organism:
Methylocystis bryophila
NCBI taxonomy Id: 655015
Other names: DSM 21852, M. bryophila, Methylocystis bryophila Belova et al. 2013, Methylocystis sp. H2s, Methylocystis sp. S284, VKM B-2545, strain H2s
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