(21 nodes) Intramolecular transferase activity network (Zunongwangia profunda)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Predicted Interactions

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protein homology

Your Input:
	hemL	Glutamate-1-semialdehyde 2,1-aminomutase. (430 aa)
	ZPR_0822	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (352 aa)
	gpmI	Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (505 aa)
	truA	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (250 aa)
	ZPR_1469	methylmalonyl-CoA mutase. (707 aa)
	ZPR_1470	methylmalonyl-CoA mutase small subunit. (466 aa)
	ZPR_1699	Pseudouridylate synthase. (235 aa)
	ZPR_1714	Isochorismate synthase. (379 aa)
	ZPR_1735	Phosphomannomutase/phosphoglucomutase. (461 aa)
	ZPR_1946	Conserved hypothetical protein. (206 aa)
	truA-2	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (262 aa)
	ZPR_2030	Phosphoglucomutase/phosphomannomutase. (576 aa)
	ZPR_2285	Pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family. (190 aa)
	ZPR_2755	Conserved hypothetical protein. (215 aa)
	icmF	methylmalonyl-CoA mutase-like protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1148 aa)
	ZPR_3524	Bifunctional AroA(G) protein. (360 aa)
	ZPR_3830	Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. (278 aa)
	purE	Phosphoribosylaminoimidazole carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (162 aa)
	ZPR_4207	Putative ribosomal large subunit pseudouridine synthase. (284 aa)
	truB	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (239 aa)
	ZPR_4538	RNA pseudouridylate synthase; Belongs to the pseudouridine synthase RluA family. (288 aa)

Your Current Organism:

Zunongwangia profunda

NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ZPR_0822	ZPR_4207	ZPR_0822	ZPR_4207	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Putative ribosomal large subunit pseudouridine synthase.	0.407
ZPR_0822	truB	ZPR_0822	ZPR_4442	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.426
ZPR_1469	ZPR_1470	ZPR_1469	ZPR_1470	methylmalonyl-CoA mutase.	methylmalonyl-CoA mutase small subunit.	0.996
ZPR_1469	icmF	ZPR_1469	ZPR_3143	methylmalonyl-CoA mutase.	methylmalonyl-CoA mutase-like protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.	0.999
ZPR_1470	ZPR_1469	ZPR_1470	ZPR_1469	methylmalonyl-CoA mutase small subunit.	methylmalonyl-CoA mutase.	0.996
ZPR_1470	icmF	ZPR_1470	ZPR_3143	methylmalonyl-CoA mutase small subunit.	methylmalonyl-CoA mutase-like protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.	0.915
ZPR_1699	ZPR_2285	ZPR_1699	ZPR_2285	Pseudouridylate synthase.	Pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	0.632
ZPR_1714	ZPR_3524	ZPR_1714	ZPR_3524	Isochorismate synthase.	Bifunctional AroA(G) protein.	0.920
ZPR_2285	ZPR_1699	ZPR_2285	ZPR_1699	Pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	Pseudouridylate synthase.	0.632
ZPR_2285	ZPR_4207	ZPR_2285	ZPR_4207	Pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	Putative ribosomal large subunit pseudouridine synthase.	0.569
ZPR_3524	ZPR_1714	ZPR_3524	ZPR_1714	Bifunctional AroA(G) protein.	Isochorismate synthase.	0.920
ZPR_3830	truB	ZPR_3830	ZPR_4442	Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.432
ZPR_4207	ZPR_0822	ZPR_4207	ZPR_0822	Putative ribosomal large subunit pseudouridine synthase.	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.407
ZPR_4207	ZPR_2285	ZPR_4207	ZPR_2285	Putative ribosomal large subunit pseudouridine synthase.	Pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	0.569
ZPR_4207	truA	ZPR_4207	ZPR_0974	Putative ribosomal large subunit pseudouridine synthase.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.420
ZPR_4207	truB	ZPR_4207	ZPR_4442	Putative ribosomal large subunit pseudouridine synthase.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.555
icmF	ZPR_1469	ZPR_3143	ZPR_1469	methylmalonyl-CoA mutase-like protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.	methylmalonyl-CoA mutase.	0.999
icmF	ZPR_1470	ZPR_3143	ZPR_1470	methylmalonyl-CoA mutase-like protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.	methylmalonyl-CoA mutase small subunit.	0.915
truA	ZPR_4207	ZPR_0974	ZPR_4207	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	Putative ribosomal large subunit pseudouridine synthase.	0.420
truA	truB	ZPR_0974	ZPR_4442	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.676