9 items (Beauveria bassiana ARSEF2860) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BBA_10291	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1261 aa)
	BBA_01228	RNA polymerase Rpb6. (659 aa)
	BBA_01952	RNA polymerase Rpb7-like domain-containing protein. (219 aa)
	BBA_02082	RNA polymerase Rpb4. (138 aa)
	BBA_00260	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1759 aa)
	BBA_07397	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (77 aa)
	BBA_08411	RNA polymerase M/15 kDa subunit. (198 aa)
	BBA_06643	DNA-directed RNA polymerase 13.3K chain. (128 aa)
	BBA_03092	RNA polymerase Rpb3/RpoA insert domain-containing protein. (350 aa)

Your Current Organism:

Beauveria bassiana ARSEF2860

NCBI taxonomy Id: 655819
Other names: B. bassiana ARSEF 2860, Beauveria bassiana ARSEF 2860

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBA_00260	BBA_01228	J4WLL9	J4KR54	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase Rpb6.	0.999
BBA_00260	BBA_01952	J4WLL9	J4UT34	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase Rpb7-like domain-containing protein.	0.999
BBA_00260	BBA_02082	J4WLL9	J4UTB6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase Rpb4.	0.999
BBA_00260	BBA_03092	J4WLL9	J5K218	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase Rpb3/RpoA insert domain-containing protein.	0.999
BBA_00260	BBA_06643	J4WLL9	J5JMH8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase 13.3K chain.	0.999
BBA_00260	BBA_07397	J4WLL9	J5JCP1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
BBA_00260	BBA_08411	J4WLL9	J5JGN0	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase M/15 kDa subunit.	0.999
BBA_00260	BBA_10291	J4WLL9	J4KKN4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BBA_01228	BBA_00260	J4KR54	J4WLL9	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BBA_01228	BBA_01952	J4KR54	J4UT34	RNA polymerase Rpb6.	RNA polymerase Rpb7-like domain-containing protein.	0.999
BBA_01228	BBA_02082	J4KR54	J4UTB6	RNA polymerase Rpb6.	RNA polymerase Rpb4.	0.999
BBA_01228	BBA_03092	J4KR54	J5K218	RNA polymerase Rpb6.	RNA polymerase Rpb3/RpoA insert domain-containing protein.	0.999
BBA_01228	BBA_06643	J4KR54	J5JMH8	RNA polymerase Rpb6.	DNA-directed RNA polymerase 13.3K chain.	0.999
BBA_01228	BBA_07397	J4KR54	J5JCP1	RNA polymerase Rpb6.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
BBA_01228	BBA_08411	J4KR54	J5JGN0	RNA polymerase Rpb6.	RNA polymerase M/15 kDa subunit.	0.999
BBA_01228	BBA_10291	J4KR54	J4KKN4	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BBA_01952	BBA_00260	J4UT34	J4WLL9	RNA polymerase Rpb7-like domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BBA_01952	BBA_01228	J4UT34	J4KR54	RNA polymerase Rpb7-like domain-containing protein.	RNA polymerase Rpb6.	0.999
BBA_01952	BBA_02082	J4UT34	J4UTB6	RNA polymerase Rpb7-like domain-containing protein.	RNA polymerase Rpb4.	0.999
BBA_01952	BBA_03092	J4UT34	J5K218	RNA polymerase Rpb7-like domain-containing protein.	RNA polymerase Rpb3/RpoA insert domain-containing protein.	0.999