30 items (Beauveria bassiana ARSEF2860) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BBA_04709	Uncharacterized protein. (329 aa)
	BBA_03695	Replication factor A protein 3. (109 aa)
	BBA_02877	Formamidopyrimidine-DNA glycosylase. (400 aa)
	BBA_01197	DNA repair metallo-beta-lactamase. (842 aa)
	BBA_00820	HIT domain-containing protein. (325 aa)
	BBA_01030	UV excision repair protein Rad23. (397 aa)
	BBA_09136	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (578 aa)
	BBA_07708	ImpB/mucB/samB family protein. (799 aa)
	BBA_04757	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (597 aa)
	BBA_03454	DNA repair protein RAD14. (383 aa)
	BBA_10031	DNA repair helicase RAD3. (749 aa)
	BBA_09855	RecF/RecN/SMC N terminal domain-containing protein. (1164 aa)
	BBA_03417	DNA repair protein rad10. (392 aa)
	BBA_02963	Rad4 transglutaminase-like domain-containing protein. (907 aa)
	BBA_01587	ImpB/mucB/samB family protein. (638 aa)
	BBA_01206	N-glycosylase/DNA lyase. (408 aa)
	BBA_07795	Nucleotide exsicion repair protein RAD7. (600 aa)
	BBA_07749	DNA repair protein. (940 aa)
	BBA_03001	ABC-type Fe3+ transport system. (247 aa)
	BBA_02175	ImpB/mucB/samB family protein. (574 aa)
	BBA_00375	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1130 aa)
	BBA_08775	6-O-methylguanine DNA methyltransferase. (141 aa)
	BBA_08454	DNA repair protein/CtIP. (691 aa)
	BBA_09241	HhH-GPD superfamily base excision DNA repair protein. (411 aa)
	BBA_06892	Ku70 protein. (642 aa)
	BBA_05249	DNA repair exonuclease rad1. (414 aa)
	BBA_06445	Zn(2)-C6 fungal-type domain-containing protein. (285 aa)
	BBA_05971	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. (716 aa)
	BBA_02814	Rad4 transglutaminase-like domain-containing protein. (839 aa)
	BBA_05042	Artemis protein. (498 aa)

Your Current Organism:

Beauveria bassiana ARSEF2860

NCBI taxonomy Id: 655819
Other names: B. bassiana ARSEF 2860, Beauveria bassiana ARSEF 2860

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBA_00375	BBA_01030	J4WM38	J5K7R4	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	UV excision repair protein Rad23.	0.654
BBA_00375	BBA_01206	J4WM38	J4UVW0	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	N-glycosylase/DNA lyase.	0.529
BBA_00375	BBA_01587	J4WM38	J4UUF6	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	ImpB/mucB/samB family protein.	0.952
BBA_00375	BBA_02175	J4WM38	J4WGX1	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	ImpB/mucB/samB family protein.	0.941
BBA_00375	BBA_03454	J4WM38	J4KPL7	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	DNA repair protein RAD14.	0.708
BBA_00375	BBA_04757	J4WM38	J4KNT5	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.632
BBA_00375	BBA_07708	J4WM38	J4KM45	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	ImpB/mucB/samB family protein.	0.977
BBA_00375	BBA_07749	J4WM38	J4VYF0	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	DNA repair protein.	0.460
BBA_00375	BBA_09241	J4WM38	J5JDH2	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	HhH-GPD superfamily base excision DNA repair protein.	0.451
BBA_00375	BBA_10031	J4WM38	J4UF35	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	DNA repair helicase RAD3.	0.543
BBA_00820	BBA_01206	J5K767	J4UVW0	HIT domain-containing protein.	N-glycosylase/DNA lyase.	0.591
BBA_00820	BBA_03417	J5K767	J4UQI9	HIT domain-containing protein.	DNA repair protein rad10.	0.479
BBA_00820	BBA_05971	J5K767	J5JQW2	HIT domain-containing protein.	ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.	0.538
BBA_00820	BBA_06892	J5K767	J5JE72	HIT domain-containing protein.	Ku70 protein.	0.538
BBA_00820	BBA_09241	J5K767	J5JDH2	HIT domain-containing protein.	HhH-GPD superfamily base excision DNA repair protein.	0.401
BBA_01030	BBA_00375	J5K7R4	J4WM38	UV excision repair protein Rad23.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.654
BBA_01030	BBA_01587	J5K7R4	J4UUF6	UV excision repair protein Rad23.	ImpB/mucB/samB family protein.	0.644
BBA_01030	BBA_02175	J5K7R4	J4WGX1	UV excision repair protein Rad23.	ImpB/mucB/samB family protein.	0.644
BBA_01030	BBA_02814	J5K7R4	J5JSN3	UV excision repair protein Rad23.	Rad4 transglutaminase-like domain-containing protein.	0.972
BBA_01030	BBA_02963	J5K7R4	J4URE3	UV excision repair protein Rad23.	Rad4 transglutaminase-like domain-containing protein.	0.972