Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATG1 | BBA_04236 | J4W0G2 | J5JP66 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Autophagy-related protein 11. | 0.987 |
| ATG1 | BBA_08383 | J4W0G2 | J5J8I8 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Kinase activator. | 0.966 |
| ATG1 | BBA_10022 | J4W0G2 | J4KKT9 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.998 |
| BBA_00331 | BBA_00507 | J5K983 | J4UWX4 | Ribosomal recycling factor. | Peptidyl-tRNA hydrolase domain-containing protein. | 0.968 |
| BBA_00331 | BBA_01176 | J5K983 | J4UVU2 | Ribosomal recycling factor. | ABC transporter. | 0.539 |
| BBA_00331 | BBA_01462 | J5K983 | J4UU73 | Ribosomal recycling factor. | Translation elongation factor G. | 0.912 |
| BBA_00331 | BBA_02439 | J5K983 | J4US46 | Ribosomal recycling factor. | Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | 0.538 |
| BBA_00331 | BBA_02832 | J5K983 | J5K127 | Ribosomal recycling factor. | Elongation factor Tu GTP binding domain-containing protein. | 0.463 |
| BBA_00331 | BBA_03289 | J5K983 | J4KPI4 | Ribosomal recycling factor. | RF-1 domain-containing protein. | 0.845 |
| BBA_00331 | BBA_04082 | J5K983 | J4KP40 | Ribosomal recycling factor. | Eukaryotic peptide chain release factor subunit 1 (ERF1). | 0.479 |
| BBA_00331 | BBA_04861 | J5K983 | J5JM41 | Ribosomal recycling factor. | RF-1 domain-containing protein. | 0.813 |
| BBA_00507 | BBA_00331 | J4UWX4 | J5K983 | Peptidyl-tRNA hydrolase domain-containing protein. | Ribosomal recycling factor. | 0.968 |
| BBA_00507 | BBA_01462 | J4UWX4 | J4UU73 | Peptidyl-tRNA hydrolase domain-containing protein. | Translation elongation factor G. | 0.681 |
| BBA_00507 | BBA_03289 | J4UWX4 | J4KPI4 | Peptidyl-tRNA hydrolase domain-containing protein. | RF-1 domain-containing protein. | 0.897 |
| BBA_00507 | BBA_04861 | J4UWX4 | J5JM41 | Peptidyl-tRNA hydrolase domain-containing protein. | RF-1 domain-containing protein. | 0.904 |
| BBA_00885 | BBA_01378 | J5K7C3 | J5JY69 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.973 |
| BBA_00885 | BBA_08042 | J5K7C3 | J5JHV7 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Serine/threonine-protein kinase plo1. | 0.822 |
| BBA_00885 | BBA_08630 | J5K7C3 | J4KLL4 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.716 |
| BBA_01088 | BBA_02004 | J4KR26 | J4KQC6 | DnaJ domain-containing protein. | UBA/TS-N domain-containing protein. | 0.553 |
| BBA_01176 | BBA_00331 | J4UVU2 | J5K983 | ABC transporter. | Ribosomal recycling factor. | 0.539 |
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