6 items (Beauveria bassiana ARSEF2860) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BBA_07040	RNA polymerase III subunit Rpc25. (195 aa)
	BBA_00288	RNA polymerase N/8 kDa subunit. (79 aa)
	BBA_07397	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (77 aa)
	BBA_04073	DNA-directed RNA polymerases I and III subunit RPAC2. (156 aa)
	BBA_06293	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (267 aa)
	BBA_01228	RNA polymerase Rpb6. (659 aa)

Your Current Organism:

Beauveria bassiana ARSEF2860

NCBI taxonomy Id: 655819
Other names: B. bassiana ARSEF 2860, Beauveria bassiana ARSEF 2860

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBA_00288	BBA_01228	J5K2R0	J4KR54	RNA polymerase N/8 kDa subunit.	RNA polymerase Rpb6.	0.999
BBA_00288	BBA_04073	J5K2R0	J4W9D0	RNA polymerase N/8 kDa subunit.	DNA-directed RNA polymerases I and III subunit RPAC2.	0.999
BBA_00288	BBA_06293	J5K2R0	J4KMX7	RNA polymerase N/8 kDa subunit.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.950
BBA_00288	BBA_07040	J5K2R0	J4W0I1	RNA polymerase N/8 kDa subunit.	RNA polymerase III subunit Rpc25.	0.997
BBA_00288	BBA_07397	J5K2R0	J5JCP1	RNA polymerase N/8 kDa subunit.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
BBA_01228	BBA_00288	J4KR54	J5K2R0	RNA polymerase Rpb6.	RNA polymerase N/8 kDa subunit.	0.999
BBA_01228	BBA_04073	J4KR54	J4W9D0	RNA polymerase Rpb6.	DNA-directed RNA polymerases I and III subunit RPAC2.	0.999
BBA_01228	BBA_06293	J4KR54	J4KMX7	RNA polymerase Rpb6.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.977
BBA_01228	BBA_07040	J4KR54	J4W0I1	RNA polymerase Rpb6.	RNA polymerase III subunit Rpc25.	0.998
BBA_01228	BBA_07397	J4KR54	J5JCP1	RNA polymerase Rpb6.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
BBA_04073	BBA_00288	J4W9D0	J5K2R0	DNA-directed RNA polymerases I and III subunit RPAC2.	RNA polymerase N/8 kDa subunit.	0.999
BBA_04073	BBA_01228	J4W9D0	J4KR54	DNA-directed RNA polymerases I and III subunit RPAC2.	RNA polymerase Rpb6.	0.999
BBA_04073	BBA_06293	J4W9D0	J4KMX7	DNA-directed RNA polymerases I and III subunit RPAC2.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.984
BBA_04073	BBA_07040	J4W9D0	J4W0I1	DNA-directed RNA polymerases I and III subunit RPAC2.	RNA polymerase III subunit Rpc25.	0.999
BBA_04073	BBA_07397	J4W9D0	J5JCP1	DNA-directed RNA polymerases I and III subunit RPAC2.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.997
BBA_06293	BBA_00288	J4KMX7	J5K2R0	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	RNA polymerase N/8 kDa subunit.	0.950
BBA_06293	BBA_01228	J4KMX7	J4KR54	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	RNA polymerase Rpb6.	0.977
BBA_06293	BBA_04073	J4KMX7	J4W9D0	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed RNA polymerases I and III subunit RPAC2.	0.984
BBA_06293	BBA_07040	J4KMX7	J4W0I1	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	RNA polymerase III subunit Rpc25.	0.986
BBA_06293	BBA_07397	J4KMX7	J5JCP1	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.948