Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATG1 | BBA_02667 | J4W0G2 | J4WFD6 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Cyclin-like protein. | 0.739 |
| ATG1 | BBA_02848 | J4W0G2 | J4UR61 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.999 |
| ATG1 | BBA_02861 | J4W0G2 | J4WD41 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Cell division control protein 2; Belongs to the protein kinase superfamily. | 0.722 |
| ATG1 | BBA_03697 | J4W0G2 | J5JPV0 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | RhoGAP domain-containing protein. | 0.800 |
| ATG1 | BBA_03698 | J4W0G2 | J4KPA7 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Nuclear protein SNF4. | 0.800 |
| ATG1 | BBA_06905 | J4W0G2 | J5JM78 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Phosphoinositide 3-kinase regulatory subunit 4. | 0.989 |
| ATG1 | BBA_07154 | J4W0G2 | J4VZX2 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | 5'-AMP-activated protein kinase. | 0.800 |
| ATG1 | BBA_08345 | J4W0G2 | J4VW14 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Protein tyrosine kinase; Belongs to the protein kinase superfamily. | 0.767 |
| ATG1 | BBA_08950 | J4W0G2 | J5J6N4 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Phosphatidylinositol 3-kinase VPS34. | 0.989 |
| ATG1 | BBA_10114 | J4W0G2 | J4UEZ3 | Serine/threonine-protein kinase ATG1; Serine/threonine protein kinase involved in the cytoplasm to vacuole transport (Cvt) and found to be essential in autophagy, where it is required for the formation of autophagosomes. Involved in the clearance of protein aggregates which cannot be efficiently cleared by the proteasome (By similarity). Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirement [...] | Extensin-like protein. | 0.670 |
| BBA_00015 | BBA_00260 | J4WKW7 | J4WLL9 | Transcription regulator cyclin; Belongs to the cyclin family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.965 |
| BBA_00015 | BBA_00317 | J4WKW7 | J4UWI4 | Transcription regulator cyclin; Belongs to the cyclin family. | Transcription initiation factor IID. | 0.737 |
| BBA_00015 | BBA_01106 | J4WKW7 | J4UVQ0 | Transcription regulator cyclin; Belongs to the cyclin family. | Chromatin remodeling complex subunit. | 0.420 |
| BBA_00015 | BBA_01151 | J4WKW7 | J4UVS6 | Transcription regulator cyclin; Belongs to the cyclin family. | RNA polymerase Rpb3/RpoA insert domain-containing protein. | 0.567 |
| BBA_00015 | BBA_01228 | J4WKW7 | J4KR54 | Transcription regulator cyclin; Belongs to the cyclin family. | RNA polymerase Rpb6. | 0.717 |
| BBA_00015 | BBA_01438 | J4WKW7 | J5JYD9 | Transcription regulator cyclin; Belongs to the cyclin family. | Transcription factor IIA. | 0.710 |
| BBA_00015 | BBA_01451 | J4WKW7 | J5K5X8 | Transcription regulator cyclin; Belongs to the cyclin family. | Uncharacterized protein. | 0.644 |
| BBA_00015 | BBA_01952 | J4WKW7 | J4UT34 | Transcription regulator cyclin; Belongs to the cyclin family. | RNA polymerase Rpb7-like domain-containing protein. | 0.709 |
| BBA_00015 | BBA_02104 | J4WKW7 | J4KQE6 | Transcription regulator cyclin; Belongs to the cyclin family. | Transcription initiation factor IIF. | 0.742 |
| BBA_00015 | BBA_02520 | J4WKW7 | J5JUT5 | Transcription regulator cyclin; Belongs to the cyclin family. | CTD kinase subunit alpha. | 0.971 |
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