29 items (Beauveria bassiana ARSEF2860) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BBA_05134	Putative RAD55 protein. (414 aa)
	BBA_05979	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (667 aa)
	BBA_05785	Nitrogen permease reactivator protein. (784 aa)
	BBA_04757	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (597 aa)
	BBA_04842	CIA30 family protein. (229 aa)
	BBA_02386	Uncharacterized protein. (192 aa)
	BBA_09309	Ubiquitin family protein. (153 aa)
	BBA_08648	Ran1-like protein kinase. (512 aa)
	BBA_08596	DNA polymerase delta. (200 aa)
	BBA_06669	Protein kinase. (405 aa)
	SLX1	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (309 aa)
	BBA_05912	DNA repair endonuclease rad2. (808 aa)
	BBA_05511	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (478 aa)
	BBA_03881	Ubiquitin subgroup. (212 aa)
	BBA_03507	DNA polymerase subunit Cdc27. (427 aa)
	BBA_05596	DNA repair protein RAD57. (495 aa)
	BBA_01315	RecQ mediated genome instability protein Rmi1. (249 aa)
	BBA_00215	Serine/threonine-protein kinase chk1. (570 aa)
	BBA_07722	Serine/threonine-protein kinase ppk24. (734 aa)
	BBA_06645	3'-5' exonuclease. (623 aa)
	BBA_01876	Asparaginyl-tRNA synthetase. (588 aa)
	BBA_08773	ERCC4 domain-containing protein. (658 aa)
	BBA_07971	RecQ family ATP-dependent DNA helicase. (1678 aa)
	BBA_07310	ATP-dependent DNA helicase recQ. (732 aa)
	BBA_04071	Serine/threonine-protein kinase hal4; Belongs to the protein kinase superfamily. (497 aa)
	BBA_03393	BZIP domain-containing protein. (297 aa)
	BBA_02058	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (348 aa)
	BBA_02088	Crossover junction endonuclease MUS81. (578 aa)
	BBA_00003	Uncharacterized protein. (253 aa)

Your Current Organism:

Beauveria bassiana ARSEF2860

NCBI taxonomy Id: 655819
Other names: B. bassiana ARSEF 2860, Beauveria bassiana ARSEF 2860

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBA_00003	BBA_00215	J5K1R9	J4WLH3	Uncharacterized protein.	Serine/threonine-protein kinase chk1.	0.763
BBA_00003	BBA_01315	J5K1R9	J4WHL1	Uncharacterized protein.	RecQ mediated genome instability protein Rmi1.	0.919
BBA_00003	BBA_01876	J5K1R9	J5K468	Uncharacterized protein.	Asparaginyl-tRNA synthetase.	0.565
BBA_00003	BBA_02058	J5K1R9	J5JWN8	Uncharacterized protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.935
BBA_00003	BBA_02088	J5K1R9	J5JWS5	Uncharacterized protein.	Crossover junction endonuclease MUS81.	0.916
BBA_00003	BBA_02386	J5K1R9	J4KQ09	Uncharacterized protein.	Uncharacterized protein.	0.565
BBA_00003	BBA_03393	J5K1R9	J5JRM3	Uncharacterized protein.	BZIP domain-containing protein.	0.510
BBA_00003	BBA_03507	J5K1R9	J4UQQ4	Uncharacterized protein.	DNA polymerase subunit Cdc27.	0.641
BBA_00003	BBA_03881	J5K1R9	J4UPW9	Uncharacterized protein.	Ubiquitin subgroup.	0.526
BBA_00003	BBA_04071	J5K1R9	J5JNN6	Uncharacterized protein.	Serine/threonine-protein kinase hal4; Belongs to the protein kinase superfamily.	0.520
BBA_00003	BBA_04757	J5K1R9	J4KNT5	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.922
BBA_00003	BBA_04842	J5K1R9	J4KNV2	Uncharacterized protein.	CIA30 family protein.	0.510
BBA_00003	BBA_05134	J5K1R9	J5JJR5	Uncharacterized protein.	Putative RAD55 protein.	0.815
BBA_00003	BBA_05596	J5K1R9	J4W4G5	Uncharacterized protein.	DNA repair protein RAD57.	0.887
BBA_00003	BBA_05785	J5K1R9	J4KNC3	Uncharacterized protein.	Nitrogen permease reactivator protein.	0.520
BBA_00003	BBA_05912	J5K1R9	J4UL31	Uncharacterized protein.	DNA repair endonuclease rad2.	0.732
BBA_00003	BBA_05979	J5K1R9	J4KN74	Uncharacterized protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.936
BBA_00003	BBA_06645	J5K1R9	J5JEI9	Uncharacterized protein.	3'-5' exonuclease.	0.580
BBA_00003	BBA_06669	J5K1R9	J4UJX4	Uncharacterized protein.	Protein kinase.	0.520
BBA_00003	BBA_07722	J5K1R9	J5JB22	Uncharacterized protein.	Serine/threonine-protein kinase ppk24.	0.520