Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BBA_00310 | BBA_07734 | J4WLT0 | J4VYD5 | Mismatch-specific thymine-DNA glycosylate. | DNA lyase. | 0.852 |
| BBA_00310 | BBA_07960 | J4WLT0 | J4VXR2 | Mismatch-specific thymine-DNA glycosylate. | Methyl-CpG-binding domain-containing protein 4. | 0.473 |
| BBA_00310 | BBA_09136 | J4WLT0 | J4KLA9 | Mismatch-specific thymine-DNA glycosylate. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.512 |
| BBA_00310 | NTH1 | J4WLT0 | J5JB00 | Mismatch-specific thymine-DNA glycosylate. | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.538 |
| BBA_00823 | BBA_04757 | J4KQX3 | J4KNT5 | Telomere-binding alpha subunit central domain-containing protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.622 |
| BBA_00823 | BBA_09945 | J4KQX3 | J5J2Q8 | Telomere-binding alpha subunit central domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.693 |
| BBA_01206 | BBA_07734 | J4UVW0 | J4VYD5 | N-glycosylase/DNA lyase. | DNA lyase. | 0.906 |
| BBA_01206 | BBA_09136 | J4UVW0 | J4KLA9 | N-glycosylase/DNA lyase. | Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. | 0.517 |
| BBA_01206 | BBA_09482 | J4UVW0 | J4UFX6 | N-glycosylase/DNA lyase. | Polynucleotide kinase 3 phosphatase. | 0.511 |
| BBA_01206 | NTH1 | J4UVW0 | J5JB00 | N-glycosylase/DNA lyase. | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.685 |
| BBA_01897 | BBA_03122 | J4UT00 | J5K261 | Anthranilate synthase component II. | Acriflavine sensitivity control protein acr-2. | 0.837 |
| BBA_01897 | BBA_03180 | J4UT00 | J4KPY9 | Anthranilate synthase component II. | Acriflavine sensitivity control protein acr-2. | 0.837 |
| BBA_01897 | BBA_03787 | J4UT00 | J5JQ71 | Anthranilate synthase component II. | ATPase protein. | 0.527 |
| BBA_01897 | BBA_04757 | J4UT00 | J4KNT5 | Anthranilate synthase component II. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.648 |
| BBA_01897 | BBA_07734 | J4UT00 | J4VYD5 | Anthranilate synthase component II. | DNA lyase. | 0.656 |
| BBA_01897 | BBA_09945 | J4UT00 | J5J2Q8 | Anthranilate synthase component II. | Histone H2B; Belongs to the histone H2B family. | 0.572 |
| BBA_02013 | BBA_04757 | J5JWI6 | J4KNT5 | Aggrecan core protein isoform 1. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.719 |
| BBA_02013 | BBA_09945 | J5JWI6 | J5J2Q8 | Aggrecan core protein isoform 1. | Histone H2B; Belongs to the histone H2B family. | 0.475 |
| BBA_03122 | BBA_01897 | J5K261 | J4UT00 | Acriflavine sensitivity control protein acr-2. | Anthranilate synthase component II. | 0.837 |
| BBA_03122 | BBA_06573 | J5K261 | J4KMU8 | Acriflavine sensitivity control protein acr-2. | Poly [ADP-ribose] polymerase. | 0.837 |
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