6 items (Metarhizium acridum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MAC_01640	Uncharacterized protein. (514 aa)
	MAC_03028	Ran GTPase activating protein 1. (417 aa)
	MAC_03613	Exportin-1. (1068 aa)
	MAC_04720	KapL. (1211 aa)
	MAC_05108	Chromosome segregation protein Cse1, putative. (959 aa)
	MAC_05258	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)

Your Current Organism:

Metarhizium acridum

NCBI taxonomy Id: 655827
Other names: M. acridum CQMa 102, Metarhizium acridum CQMa 102, Metarhizium anisopliae var. acridum CQMa 102

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MAC_01640	MAC_03028	E9DVJ2	E9DZI0	Uncharacterized protein.	Ran GTPase activating protein 1.	0.858
MAC_01640	MAC_03613	E9DVJ2	E9E165	Uncharacterized protein.	Exportin-1.	0.879
MAC_01640	MAC_04720	E9DVJ2	E9E4C2	Uncharacterized protein.	KapL.	0.540
MAC_01640	MAC_05108	E9DVJ2	E9E5G0	Uncharacterized protein.	Chromosome segregation protein Cse1, putative.	0.483
MAC_01640	MAC_05258	E9DVJ2	E9E5W0	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.953
MAC_03028	MAC_01640	E9DZI0	E9DVJ2	Ran GTPase activating protein 1.	Uncharacterized protein.	0.858
MAC_03028	MAC_03613	E9DZI0	E9E165	Ran GTPase activating protein 1.	Exportin-1.	0.701
MAC_03028	MAC_04720	E9DZI0	E9E4C2	Ran GTPase activating protein 1.	KapL.	0.588
MAC_03028	MAC_05258	E9DZI0	E9E5W0	Ran GTPase activating protein 1.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.957
MAC_03613	MAC_01640	E9E165	E9DVJ2	Exportin-1.	Uncharacterized protein.	0.879
MAC_03613	MAC_03028	E9E165	E9DZI0	Exportin-1.	Ran GTPase activating protein 1.	0.701
MAC_03613	MAC_04720	E9E165	E9E4C2	Exportin-1.	KapL.	0.636
MAC_03613	MAC_05108	E9E165	E9E5G0	Exportin-1.	Chromosome segregation protein Cse1, putative.	0.811
MAC_03613	MAC_05258	E9E165	E9E5W0	Exportin-1.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.999
MAC_04720	MAC_01640	E9E4C2	E9DVJ2	KapL.	Uncharacterized protein.	0.540
MAC_04720	MAC_03028	E9E4C2	E9DZI0	KapL.	Ran GTPase activating protein 1.	0.588
MAC_04720	MAC_03613	E9E4C2	E9E165	KapL.	Exportin-1.	0.636
MAC_04720	MAC_05108	E9E4C2	E9E5G0	KapL.	Chromosome segregation protein Cse1, putative.	0.692
MAC_04720	MAC_05258	E9E4C2	E9E5W0	KapL.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.996
MAC_05108	MAC_01640	E9E5G0	E9DVJ2	Chromosome segregation protein Cse1, putative.	Uncharacterized protein.	0.483