(39 nodes) AMP-binding, conserved site network (Metarhizium acridum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MAC_00212	AMP-binding enzyme, putative. (563 aa)
	MAC_00620	AMP-binding domain protein. (567 aa)
	MAC_00986	Phenylacetyl-CoA ligase. (492 aa)
	MAC_00766	Nonribosomal peptide synthetase 4. (307 aa)
	MAC_01111	Polyketide synthase. (3864 aa)
	MAC_01637	Acetoacetyl-CoA synthase. (652 aa)
	MAC_01723	Transferase family protein. (2241 aa)
	MAC_01860	Long-chain-fatty-acid-CoA ligase, putative. (570 aa)
	MAC_01861	Peptide synthetase. (1644 aa)
	MAC_02074	Acetoacetyl-CoA synthase. (724 aa)
	MAC_02652	Long-chain acyl-CoA synthetases & Acyl-protein synthetase. (693 aa)
	MAC_02762	Nonribosomal peptide synthase. (10186 aa)
	MAC_02881	Peptide synthetase. (5435 aa)
	MAC_03801	NRPS-like enzyme, putative. (336 aa)
	MAC_03827	Acetate-CoA ligase. (703 aa)
	MAC_04115	Acetoacetyl-CoA synthase. (735 aa)
	MAC_04199	Putative long-chain-fatty-acid--CoA ligase FAA2. (671 aa)
	MAC_04406	Nonribosomal peptide synthase. (10285 aa)
	MAC_04974	Peptide synthetase. (5358 aa)
	MAC_05398	Nonribosomal peptide synthase, putative. (3530 aa)
	MAC_05407	AMP-binding enzyme, putative. (358 aa)
	MAC_05687	Nonribosomal peptide synthase. (1879 aa)
	MAC_06316	Nonribosomal peptide synthetase 10. (1281 aa)
	MAC_06547	Acetyl-coenzyme A synthetase. (657 aa)
	MAC_06860	Nonribosomal peptide synthase, putative. (1173 aa)
	MAC_07356	AMP dependent CoA ligase. (588 aa)
	MAC_07387	4-coumarate-CoA ligase 2. (544 aa)
	MAC_07604	Nonribosomal peptide synthase, putative. (2607 aa)
	MAC_07911	NRPS-like enzyme, putative. (1064 aa)
	MAC_07977	Peptide synthetase. (4838 aa)
	MAC_08214	Nonribosomal peptide synthase GliP-like, putative. (1693 aa)
	MAC_08463	AMP-binding enzyme domain protein. (565 aa)
	MAC_08860	Amino acid adenylation domain protein. (1605 aa)
	MAC_08899	Nonribosomal peptide synthase, putative. (9390 aa)
	MAC_09049	Long-chain fatty acid transporter, putative. (639 aa)
	MAC_09442	Putative long-chain-fatty-acid--CoA ligase FAA2. (705 aa)
	MAC_09498	Aminoadipate-semialdehyde dehydrogenase, putative. (1616 aa)
	MAC_09549	Polyketide synthase. (2488 aa)
	MAC_09675	Aminoadipate reductase enzyme. (1178 aa)

Your Current Organism:

Metarhizium acridum

NCBI taxonomy Id: 655827
Other names: M. acridum CQMa 102, Metarhizium acridum CQMa 102, Metarhizium anisopliae var. acridum CQMa 102

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MAC_00212	MAC_01637	E9DR43	E9DVI9	AMP-binding enzyme, putative.	Acetoacetyl-CoA synthase.	0.468
MAC_00212	MAC_02074	E9DR43	E9DWS6	AMP-binding enzyme, putative.	Acetoacetyl-CoA synthase.	0.468
MAC_00212	MAC_02652	E9DR43	E9DYF5	AMP-binding enzyme, putative.	Long-chain acyl-CoA synthetases & Acyl-protein synthetase.	0.459
MAC_00212	MAC_03827	E9DR43	E9E1X2	AMP-binding enzyme, putative.	Acetate-CoA ligase.	0.468
MAC_00212	MAC_04115	E9DR43	E9E2L7	AMP-binding enzyme, putative.	Acetoacetyl-CoA synthase.	0.468
MAC_00212	MAC_04199	E9DR43	E9E2V1	AMP-binding enzyme, putative.	Putative long-chain-fatty-acid--CoA ligase FAA2.	0.434
MAC_00212	MAC_05407	E9DR43	E9E6A9	AMP-binding enzyme, putative.	AMP-binding enzyme, putative.	0.905
MAC_00212	MAC_05687	E9DR43	E9E739	AMP-binding enzyme, putative.	Nonribosomal peptide synthase.	0.428
MAC_00212	MAC_06547	E9DR43	E9E9J9	AMP-binding enzyme, putative.	Acetyl-coenzyme A synthetase.	0.468
MAC_00212	MAC_09442	E9DR43	E9EHU4	AMP-binding enzyme, putative.	Putative long-chain-fatty-acid--CoA ligase FAA2.	0.411
MAC_00620	MAC_01637	E9DSM2	E9DVI9	AMP-binding domain protein.	Acetoacetyl-CoA synthase.	0.468
MAC_00620	MAC_02074	E9DSM2	E9DWS6	AMP-binding domain protein.	Acetoacetyl-CoA synthase.	0.468
MAC_00620	MAC_02652	E9DSM2	E9DYF5	AMP-binding domain protein.	Long-chain acyl-CoA synthetases & Acyl-protein synthetase.	0.443
MAC_00620	MAC_03827	E9DSM2	E9E1X2	AMP-binding domain protein.	Acetate-CoA ligase.	0.468
MAC_00620	MAC_04115	E9DSM2	E9E2L7	AMP-binding domain protein.	Acetoacetyl-CoA synthase.	0.468
MAC_00620	MAC_05687	E9DSM2	E9E739	AMP-binding domain protein.	Nonribosomal peptide synthase.	0.428
MAC_00620	MAC_06547	E9DSM2	E9E9J9	AMP-binding domain protein.	Acetyl-coenzyme A synthetase.	0.468
MAC_00766	MAC_09675	E9DTC8	E9EIH7	Nonribosomal peptide synthetase 4.	Aminoadipate reductase enzyme.	0.471
MAC_00986	MAC_01637	E9DTA4	E9DVI9	Phenylacetyl-CoA ligase.	Acetoacetyl-CoA synthase.	0.468
MAC_00986	MAC_02074	E9DTA4	E9DWS6	Phenylacetyl-CoA ligase.	Acetoacetyl-CoA synthase.	0.468