(12 nodes) Acyl-CoA dehydrogenase, middle domain network (Metarhizium acridum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MAC_05128	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (683 aa)
	MAC_09161	Acyl-CoA dehydrogenase. (423 aa)
	MAC_09629	Acyl-CoA dehydrogenase. (433 aa)
	MAC_00217	Acyl-CoA dehydrogenase, putative. (441 aa)
	MAC_00832	Isovaleryl-CoA dehydrogenase. (401 aa)
	MAC_01490	Glutaryl-CoA dehydrogenase. (427 aa)
	MAC_01470	Acyl-CoA dehydrogenase. (540 aa)
	MAC_03910	Acyl-CoA dehydrogenase. (530 aa)
	MAC_03923	(R)-benzylsuccinyl-CoA dehydrogenase. (455 aa)
	MAC_03998	Acyl-CoA dehydrogenase. (447 aa)
	MAC_04770	Uncharacterized protein. (439 aa)
	MAC_07047	Putative acyl-CoA dehydrogenase. (514 aa)

Your Current Organism:

Metarhizium acridum

NCBI taxonomy Id: 655827
Other names: M. acridum CQMa 102, Metarhizium acridum CQMa 102, Metarhizium anisopliae var. acridum CQMa 102

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MAC_00832	MAC_03923	E9DTJ4	E9E225	Isovaleryl-CoA dehydrogenase.	(R)-benzylsuccinyl-CoA dehydrogenase.	0.913
MAC_00832	MAC_04770	E9DTJ4	E9E4H2	Isovaleryl-CoA dehydrogenase.	Uncharacterized protein.	0.911
MAC_01490	MAC_03923	E9DUV7	E9E225	Glutaryl-CoA dehydrogenase.	(R)-benzylsuccinyl-CoA dehydrogenase.	0.914
MAC_01490	MAC_04770	E9DUV7	E9E4H2	Glutaryl-CoA dehydrogenase.	Uncharacterized protein.	0.904
MAC_01490	MAC_05128	E9DUV7	E9E5I0	Glutaryl-CoA dehydrogenase.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.911
MAC_03923	MAC_00832	E9E225	E9DTJ4	(R)-benzylsuccinyl-CoA dehydrogenase.	Isovaleryl-CoA dehydrogenase.	0.913
MAC_03923	MAC_01490	E9E225	E9DUV7	(R)-benzylsuccinyl-CoA dehydrogenase.	Glutaryl-CoA dehydrogenase.	0.914
MAC_03923	MAC_04770	E9E225	E9E4H2	(R)-benzylsuccinyl-CoA dehydrogenase.	Uncharacterized protein.	0.906
MAC_03923	MAC_05128	E9E225	E9E5I0	(R)-benzylsuccinyl-CoA dehydrogenase.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.911
MAC_04770	MAC_00832	E9E4H2	E9DTJ4	Uncharacterized protein.	Isovaleryl-CoA dehydrogenase.	0.911
MAC_04770	MAC_01490	E9E4H2	E9DUV7	Uncharacterized protein.	Glutaryl-CoA dehydrogenase.	0.904
MAC_04770	MAC_03923	E9E4H2	E9E225	Uncharacterized protein.	(R)-benzylsuccinyl-CoA dehydrogenase.	0.906
MAC_04770	MAC_05128	E9E4H2	E9E5I0	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.909
MAC_05128	MAC_01490	E9E5I0	E9DUV7	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Glutaryl-CoA dehydrogenase.	0.911
MAC_05128	MAC_03923	E9E5I0	E9E225	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	(R)-benzylsuccinyl-CoA dehydrogenase.	0.911
MAC_05128	MAC_04770	E9E5I0	E9E4H2	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein.	0.909