(11 nodes) ER to Golgi transport vesicle membrane network (Grosmannia clavigera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_6994	Protein transport protein. (1309 aa)
	CMQ_6809	Uncharacterized protein. (328 aa)
	CMQ_4006	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family. (304 aa)
	CMQ_898	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (1892 aa)
	CMQ_5443	Sec23 sec24 family protein. (1034 aa)
	CMQ_6298	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (769 aa)
	CMQ_1839	Protein transport protein. (960 aa)
	CMQ_7310	Uncharacterized protein. (607 aa)
	CMQ_7131	Small monomeric GTPase; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)
	CMQ_7174	Uncharacterized protein. (831 aa)
	CMQ_4353	Nima-interacting protein. (882 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1839	CMQ_4006	F0XNG2	F0X9L4	Protein transport protein.	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	0.994
CMQ_1839	CMQ_4353	F0XNG2	F0XU25	Protein transport protein.	Nima-interacting protein.	0.900
CMQ_1839	CMQ_5443	F0XNG2	F0XFZ7	Protein transport protein.	Sec23 sec24 family protein.	0.972
CMQ_1839	CMQ_6298	F0XNG2	F0XM87	Protein transport protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.999
CMQ_1839	CMQ_6809	F0XNG2	F0X7Z2	Protein transport protein.	Uncharacterized protein.	0.965
CMQ_1839	CMQ_6994	F0XNG2	F0X7Z1	Protein transport protein.	Protein transport protein.	0.995
CMQ_1839	CMQ_7131	F0XNG2	F0XPS4	Protein transport protein.	Small monomeric GTPase; Belongs to the small GTPase superfamily. SAR1 family.	0.933
CMQ_1839	CMQ_7174	F0XNG2	F0XPS5	Protein transport protein.	Uncharacterized protein.	0.933
CMQ_1839	CMQ_7310	F0XNG2	F0XPR8	Protein transport protein.	Uncharacterized protein.	0.816
CMQ_1839	CMQ_898	F0XNG2	F0XCZ3	Protein transport protein.	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	0.998
CMQ_4006	CMQ_1839	F0X9L4	F0XNG2	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Protein transport protein.	0.994
CMQ_4006	CMQ_4353	F0X9L4	F0XU25	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Nima-interacting protein.	0.912
CMQ_4006	CMQ_5443	F0X9L4	F0XFZ7	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Sec23 sec24 family protein.	0.992
CMQ_4006	CMQ_6298	F0X9L4	F0XM87	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.993
CMQ_4006	CMQ_6809	F0X9L4	F0X7Z2	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.977
CMQ_4006	CMQ_6994	F0X9L4	F0X7Z1	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Protein transport protein.	0.999
CMQ_4006	CMQ_7131	F0X9L4	F0XPS4	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Small monomeric GTPase; Belongs to the small GTPase superfamily. SAR1 family.	0.915
CMQ_4006	CMQ_7174	F0X9L4	F0XPS5	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.873
CMQ_4006	CMQ_7310	F0X9L4	F0XPR8	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.606
CMQ_4006	CMQ_898	F0X9L4	F0XCZ3	Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.	Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.	0.995