(18 nodes) RHOF GTPase cycle, and CD28 dependent Vav1 pathway network (Grosmannia clavigera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_6540	Rho GTPase. (296 aa)
	CMQ_6652	Ras family GTP-binding protein rho1p. (537 aa)
	CMQ_6628	Rho guanyl nucleotide exchange factor. (996 aa)
	CMQ_3393	Protein kinase activator. (564 aa)
	CMQ_3866	Uncharacterized protein. (648 aa)
	CMQ_5284	Uncharacterized protein. (457 aa)
	CMQ_3156	Rho-like GTPase cdc42. (194 aa)
	CMQ_2641	Non-specific serine/threonine protein kinase. (843 aa)
	CMQ_5819	Rho GTPase activator. (1207 aa)
	CMQ_2144	Rho GTPase activator. (812 aa)
	CMQ_2161	Protein rho3. (208 aa)
	CMQ_8168	Rho guanyl nucleotide exchange. (2273 aa)
	CMQ_8255	Rho GTPase rho. (201 aa)
	CMQ_5941	Non-specific serine/threonine protein kinase. (1035 aa)
	CMQ_1836	Rhogap with PH domain protein. (1658 aa)
	CMQ_7793	RNA recognition motif-containing protein. (461 aa)
	CMQ_4590	Rho GTPase activator. (1218 aa)
	CMQ_4396	Rho GTPase. (199 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1836	CMQ_2144	F0XMY8	F0XJ27	Rhogap with PH domain protein.	Rho GTPase activator.	0.737
CMQ_1836	CMQ_2161	F0XMY8	F0XJ87	Rhogap with PH domain protein.	Protein rho3.	0.729
CMQ_1836	CMQ_2641	F0XMY8	F0XHK8	Rhogap with PH domain protein.	Non-specific serine/threonine protein kinase.	0.551
CMQ_1836	CMQ_3156	F0XMY8	F0XH02	Rhogap with PH domain protein.	Rho-like GTPase cdc42.	0.951
CMQ_1836	CMQ_3393	F0XMY8	F0X8F9	Rhogap with PH domain protein.	Protein kinase activator.	0.620
CMQ_1836	CMQ_4396	F0XMY8	F0XUM1	Rhogap with PH domain protein.	Rho GTPase.	0.889
CMQ_1836	CMQ_4590	F0XMY8	F0XUI3	Rhogap with PH domain protein.	Rho GTPase activator.	0.995
CMQ_1836	CMQ_5284	F0XMY8	F0XBD2	Rhogap with PH domain protein.	Uncharacterized protein.	0.602
CMQ_1836	CMQ_5819	F0XMY8	F0XIE3	Rhogap with PH domain protein.	Rho GTPase activator.	0.711
CMQ_1836	CMQ_5941	F0XMY8	F0XLV8	Rhogap with PH domain protein.	Non-specific serine/threonine protein kinase.	0.551
CMQ_1836	CMQ_6540	F0XMY8	F0X6Q5	Rhogap with PH domain protein.	Rho GTPase.	0.722
CMQ_1836	CMQ_6628	F0XMY8	F0X7S3	Rhogap with PH domain protein.	Rho guanyl nucleotide exchange factor.	0.548
CMQ_1836	CMQ_6652	F0XMY8	F0X6Z3	Rhogap with PH domain protein.	Ras family GTP-binding protein rho1p.	0.734
CMQ_1836	CMQ_8255	F0XMY8	F0XL44	Rhogap with PH domain protein.	Rho GTPase rho.	0.771
CMQ_2144	CMQ_1836	F0XJ27	F0XMY8	Rho GTPase activator.	Rhogap with PH domain protein.	0.737
CMQ_2144	CMQ_2161	F0XJ27	F0XJ87	Rho GTPase activator.	Protein rho3.	0.840
CMQ_2144	CMQ_2641	F0XJ27	F0XHK8	Rho GTPase activator.	Non-specific serine/threonine protein kinase.	0.748
CMQ_2144	CMQ_3156	F0XJ27	F0XH02	Rho GTPase activator.	Rho-like GTPase cdc42.	0.840
CMQ_2144	CMQ_3393	F0XJ27	F0X8F9	Rho GTPase activator.	Protein kinase activator.	0.486
CMQ_2144	CMQ_4396	F0XJ27	F0XUM1	Rho GTPase activator.	Rho GTPase.	0.829