20 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_5379	Serine/threonine-protein kinase. (674 aa)
	CMQ_888	WD repeat-containing protein. (361 aa)
	CMQ_435	Beta-glucanase. (371 aa)
	CMQ_701	RNA annealing protein. (251 aa)
	CMQ_1095	Zinc finger DNA-binding protein. (374 aa)
	CMQ_1147	Uncharacterized protein. (607 aa)
	CMQ_460	Fungal transcriptional regulatory protein. (644 aa)
	CMQ_817	Uncharacterized protein. (218 aa)
	CMQ_2667	G-patch domain containing protein. (370 aa)
	CMQ_2614	Tho complex subunit. (772 aa)
	CMQ_2683	U2 auxiliary factor small. (208 aa)
	CMQ_3114	mRNA export factor mex67. (645 aa)
	CMQ_8237	Pre-RNA splicing factor. (398 aa)
	CMQ_6032	Transformer-SR ribonucleoprotein. (235 aa)
	CMQ_6147	DNA-binding protein. (312 aa)
	CMQ_163	Uncharacterized protein. (414 aa)
	CMQ_262	RNA-binding protein. (319 aa)
	CMQ_5683	Pre-mRNA splicing factor. (179 aa)
	CMQ_5517	Uncharacterized protein. (171 aa)
	CMQ_5580	ATP dependent RNA helicase. (440 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1095	CMQ_1147	F0XDR1	F0XEH5	Zinc finger DNA-binding protein.	Uncharacterized protein.	0.529
CMQ_1095	CMQ_163	F0XDR1	F0XRJ0	Zinc finger DNA-binding protein.	Uncharacterized protein.	0.886
CMQ_1095	CMQ_2614	F0XDR1	F0XH29	Zinc finger DNA-binding protein.	Tho complex subunit.	0.912
CMQ_1095	CMQ_262	F0XDR1	F0XRJ6	Zinc finger DNA-binding protein.	RNA-binding protein.	0.857
CMQ_1095	CMQ_3114	F0XDR1	F0XI66	Zinc finger DNA-binding protein.	mRNA export factor mex67.	0.710
CMQ_1095	CMQ_435	F0XDR1	F0XD16	Zinc finger DNA-binding protein.	Beta-glucanase.	0.623
CMQ_1095	CMQ_5517	F0XDR1	F0XSK1	Zinc finger DNA-binding protein.	Uncharacterized protein.	0.520
CMQ_1095	CMQ_5580	F0XDR1	F0XTC3	Zinc finger DNA-binding protein.	ATP dependent RNA helicase.	0.917
CMQ_1095	CMQ_5683	F0XDR1	F0XSH5	Zinc finger DNA-binding protein.	Pre-mRNA splicing factor.	0.591
CMQ_1095	CMQ_6147	F0XDR1	F0XME1	Zinc finger DNA-binding protein.	DNA-binding protein.	0.746
CMQ_1095	CMQ_701	F0XDR1	F0XDF0	Zinc finger DNA-binding protein.	RNA annealing protein.	0.857
CMQ_1095	CMQ_817	F0XDR1	F0XF01	Zinc finger DNA-binding protein.	Uncharacterized protein.	0.896
CMQ_1095	CMQ_8237	F0XDR1	F0XKF8	Zinc finger DNA-binding protein.	Pre-RNA splicing factor.	0.591
CMQ_1095	CMQ_888	F0XDR1	F0XC84	Zinc finger DNA-binding protein.	WD repeat-containing protein.	0.911
CMQ_1147	CMQ_1095	F0XEH5	F0XDR1	Uncharacterized protein.	Zinc finger DNA-binding protein.	0.529
CMQ_1147	CMQ_2614	F0XEH5	F0XH29	Uncharacterized protein.	Tho complex subunit.	0.573
CMQ_1147	CMQ_262	F0XEH5	F0XRJ6	Uncharacterized protein.	RNA-binding protein.	0.652
CMQ_1147	CMQ_2667	F0XEH5	F0XH24	Uncharacterized protein.	G-patch domain containing protein.	0.529
CMQ_1147	CMQ_2683	F0XEH5	F0XHF2	Uncharacterized protein.	U2 auxiliary factor small.	0.707
CMQ_1147	CMQ_3114	F0XEH5	F0XI66	Uncharacterized protein.	mRNA export factor mex67.	0.699