STRINGSTRING
CMQ_7916 CMQ_7916 CMQ_3629 CMQ_3629 CMQ_566 CMQ_566 CMQ_2933 CMQ_2933 CMQ_6496 CMQ_6496 CMQ_338 CMQ_338 LSM1 LSM1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CMQ_7916Cap-binding protein; Belongs to the eukaryotic initiation factor 4E family. (247 aa)
CMQ_3629Translation initiation factor; Belongs to the eukaryotic initiation factor 4E family. (272 aa)
CMQ_566Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (966 aa)
CMQ_2933Nuclear cap-binding protein subunit 2. (218 aa)
CMQ_6496Uncharacterized protein. (540 aa)
CMQ_338Cap-binding protein. (868 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (182 aa)
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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