(6 nodes) DNA recombinase assembly network (Grosmannia clavigera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_1365	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (354 aa)
	CMQ_4048	DNA repair protein. (498 aa)
	CMQ_3380	Rad51 domain-containing protein. (333 aa)
	CMQ_7260	DNA repair protein, swi5. (165 aa)
	CMQ_1919	Uncharacterized protein. (241 aa)
	CMQ_1531	Rad52 DNA repair protein radc. (535 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1365	CMQ_1531	F0XDU4	F0XFN7	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Rad52 DNA repair protein radc.	0.995
CMQ_1365	CMQ_1919	F0XDU4	F0XN19	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Uncharacterized protein.	0.795
CMQ_1365	CMQ_3380	F0XDU4	F0X948	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	Rad51 domain-containing protein.	0.530
CMQ_1365	CMQ_4048	F0XDU4	F0XA61	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	DNA repair protein.	0.983
CMQ_1365	CMQ_7260	F0XDU4	F0XP18	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	DNA repair protein, swi5.	0.758
CMQ_1531	CMQ_1365	F0XFN7	F0XDU4	Rad52 DNA repair protein radc.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.995
CMQ_1531	CMQ_3380	F0XFN7	F0X948	Rad52 DNA repair protein radc.	Rad51 domain-containing protein.	0.954
CMQ_1531	CMQ_4048	F0XFN7	F0XA61	Rad52 DNA repair protein radc.	DNA repair protein.	0.890
CMQ_1919	CMQ_1365	F0XN19	F0XDU4	Uncharacterized protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.795
CMQ_1919	CMQ_3380	F0XN19	F0X948	Uncharacterized protein.	Rad51 domain-containing protein.	0.546
CMQ_1919	CMQ_4048	F0XN19	F0XA61	Uncharacterized protein.	DNA repair protein.	0.534
CMQ_1919	CMQ_7260	F0XN19	F0XP18	Uncharacterized protein.	DNA repair protein, swi5.	0.979
CMQ_3380	CMQ_1365	F0X948	F0XDU4	Rad51 domain-containing protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.530
CMQ_3380	CMQ_1531	F0X948	F0XFN7	Rad51 domain-containing protein.	Rad52 DNA repair protein radc.	0.954
CMQ_3380	CMQ_1919	F0X948	F0XN19	Rad51 domain-containing protein.	Uncharacterized protein.	0.546
CMQ_3380	CMQ_4048	F0X948	F0XA61	Rad51 domain-containing protein.	DNA repair protein.	0.975
CMQ_3380	CMQ_7260	F0X948	F0XP18	Rad51 domain-containing protein.	DNA repair protein, swi5.	0.711
CMQ_4048	CMQ_1365	F0XA61	F0XDU4	DNA repair protein.	DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.	0.983
CMQ_4048	CMQ_1531	F0XA61	F0XFN7	DNA repair protein.	Rad52 DNA repair protein radc.	0.890
CMQ_4048	CMQ_1919	F0XA61	F0XN19	DNA repair protein.	Uncharacterized protein.	0.534