25 items (Grosmannia clavigera) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	CMQ_6746	Negative regulator of DNA transposition protein. (485 aa)
	CMQ_3284	Tho complex component. (2520 aa)
	CMQ_3816	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1090 aa)
	CMQ_1291	RNA polymerase 2 transcription elongation factor. (661 aa)
	CMQ_1508	Transcription initiation factor beta subunit. (389 aa)
	CMQ_388	Cop9 signalosome complex subunit 12. (556 aa)
	CMQ_837	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1421 aa)
	CMQ_2608	Serine/threonine-protein kinase-like protein. (1306 aa)
	CMQ_2614	Tho complex subunit. (772 aa)
	CMQ_8056	Nuclear localization protein. (297 aa)
	CMQ_8134	Uncharacterized protein. (120 aa)
	CMQ_6370	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (130 aa)
	CMQ_5943	Serine/threonine-protein kinase bur1. (601 aa)
	CMQ_1860	Transcription elongation factor s 2. (332 aa)
	CMQ_2065	Cop9 signalosome complex subunit 12. (438 aa)
	CMQ_7640	DNA directed RNA polymerase 2. (208 aa)
	CMQ_7508	Zn 2cys6 cluster transcripitional activator. (586 aa)
	CMQ_7230	RNA polymerase 2 transcription elongation factor. (2074 aa)
	CMQ_329	RNA polymerase 2 transcription factor siii subunit. (389 aa)
	CMQ_163	Uncharacterized protein. (414 aa)
	CMQ_7923	Chromatin spt2 protein. (437 aa)
	CMQ_5758	Transcription elongation complex subunit. (1033 aa)
	CMQ_5528	Uncharacterized protein. (638 aa)
	CMQ_4635	RNA polymerase ii-associated, paf1. (492 aa)
	CMQ_4445	Pol 2 transcription elongation factor subunit. (428 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1291	CMQ_1860	F0XCX8	F0XN24	RNA polymerase 2 transcription elongation factor.	Transcription elongation factor s 2.	0.833
CMQ_1291	CMQ_2608	F0XCX8	F0XG66	RNA polymerase 2 transcription elongation factor.	Serine/threonine-protein kinase-like protein.	0.481
CMQ_1291	CMQ_3816	F0XCX8	F0X9Y9	RNA polymerase 2 transcription elongation factor.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.975
CMQ_1291	CMQ_4445	F0XCX8	F0XUT9	RNA polymerase 2 transcription elongation factor.	Pol 2 transcription elongation factor subunit.	0.996
CMQ_1291	CMQ_4635	F0XCX8	F0XUD9	RNA polymerase 2 transcription elongation factor.	RNA polymerase ii-associated, paf1.	0.996
CMQ_1291	CMQ_5528	F0XCX8	F0XT48	RNA polymerase 2 transcription elongation factor.	Uncharacterized protein.	0.969
CMQ_1291	CMQ_5758	F0XCX8	F0XSX8	RNA polymerase 2 transcription elongation factor.	Transcription elongation complex subunit.	0.963
CMQ_1291	CMQ_5943	F0XCX8	F0XM35	RNA polymerase 2 transcription elongation factor.	Serine/threonine-protein kinase bur1.	0.480
CMQ_1291	CMQ_6370	F0XCX8	F0XM21	RNA polymerase 2 transcription elongation factor.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.707
CMQ_1291	CMQ_7230	F0XCX8	F0XPV5	RNA polymerase 2 transcription elongation factor.	RNA polymerase 2 transcription elongation factor.	0.996
CMQ_1291	CMQ_7640	F0XCX8	F0XNX3	RNA polymerase 2 transcription elongation factor.	DNA directed RNA polymerase 2.	0.918
CMQ_1291	CMQ_837	F0XCX8	F0XFW5	RNA polymerase 2 transcription elongation factor.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.951
CMQ_1508	CMQ_1860	F0XE03	F0XN24	Transcription initiation factor beta subunit.	Transcription elongation factor s 2.	0.901
CMQ_1508	CMQ_3284	F0XE03	F0X8J1	Transcription initiation factor beta subunit.	Tho complex component.	0.445
CMQ_1508	CMQ_329	F0XE03	F0XRI9	Transcription initiation factor beta subunit.	RNA polymerase 2 transcription factor siii subunit.	0.639
CMQ_1508	CMQ_3816	F0XE03	F0X9Y9	Transcription initiation factor beta subunit.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.941
CMQ_1508	CMQ_4445	F0XE03	F0XUT9	Transcription initiation factor beta subunit.	Pol 2 transcription elongation factor subunit.	0.496
CMQ_1508	CMQ_4635	F0XE03	F0XUD9	Transcription initiation factor beta subunit.	RNA polymerase ii-associated, paf1.	0.691
CMQ_1508	CMQ_5528	F0XE03	F0XT48	Transcription initiation factor beta subunit.	Uncharacterized protein.	0.648
CMQ_1508	CMQ_5758	F0XE03	F0XSX8	Transcription initiation factor beta subunit.	Transcription elongation complex subunit.	0.648