24 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_6548	R3h domain protein. (662 aa)
	CMQ_3284	Tho complex component. (2520 aa)
	CMQ_3303	C3hc zinc finger protein. (586 aa)
	CMQ_5211	Transcriptional elongation factor. (468 aa)
	CMQ_888	WD repeat-containing protein. (361 aa)
	CMQ_1687	DNA directed RNA polymerase 2 polypeptide d. (143 aa)
	CMQ_701	RNA annealing protein. (251 aa)
	CMQ_1007	Fha domain containing protein. (264 aa)
	CMQ_817	Uncharacterized protein. (218 aa)
	CMQ_1094	Nuclear pore complex protein. (358 aa)
	CMQ_388	Cop9 signalosome complex subunit 12. (556 aa)
	CMQ_837	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1421 aa)
	CMQ_2614	Tho complex subunit. (772 aa)
	CMQ_3114	mRNA export factor mex67. (645 aa)
	CMQ_5015	mRNA-nucleus export ATPase. (1121 aa)
	CMQ_8293	Sem1-like protein. (94 aa)
	CMQ_6147	DNA-binding protein. (312 aa)
	CMQ_2065	Cop9 signalosome complex subunit 12. (438 aa)
	CMQ_1910	Rnp domain containing protein. (363 aa)
	CMQ_151	Importin beta-3. (1096 aa)
	CMQ_306	Leucine permease transcriptional regulator. (2072 aa)
	CMQ_338	Cap-binding protein. (868 aa)
	CMQ_163	Uncharacterized protein. (414 aa)
	CMQ_5533	E3 ubiquitin-protein ligase. (854 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1007	CMQ_338	F0XEH9	F0XRE3	Fha domain containing protein.	Cap-binding protein.	0.796
CMQ_1007	CMQ_6548	F0XEH9	F0X755	Fha domain containing protein.	R3h domain protein.	0.404
CMQ_1094	CMQ_151	F0XFR7	F0XR88	Nuclear pore complex protein.	Importin beta-3.	0.542
CMQ_1094	CMQ_163	F0XFR7	F0XRJ0	Nuclear pore complex protein.	Uncharacterized protein.	0.476
CMQ_1094	CMQ_1910	F0XFR7	F0XNH2	Nuclear pore complex protein.	Rnp domain containing protein.	0.442
CMQ_1094	CMQ_2065	F0XFR7	F0XN54	Nuclear pore complex protein.	Cop9 signalosome complex subunit 12.	0.497
CMQ_1094	CMQ_2614	F0XFR7	F0XH29	Nuclear pore complex protein.	Tho complex subunit.	0.502
CMQ_1094	CMQ_306	F0XFR7	F0XRB1	Nuclear pore complex protein.	Leucine permease transcriptional regulator.	0.617
CMQ_1094	CMQ_3114	F0XFR7	F0XI66	Nuclear pore complex protein.	mRNA export factor mex67.	0.987
CMQ_1094	CMQ_3284	F0XFR7	F0X8J1	Nuclear pore complex protein.	Tho complex component.	0.402
CMQ_1094	CMQ_338	F0XFR7	F0XRE3	Nuclear pore complex protein.	Cap-binding protein.	0.789
CMQ_1094	CMQ_5015	F0XFR7	F0XKC9	Nuclear pore complex protein.	mRNA-nucleus export ATPase.	0.600
CMQ_1094	CMQ_6147	F0XFR7	F0XME1	Nuclear pore complex protein.	DNA-binding protein.	0.445
CMQ_1094	CMQ_701	F0XFR7	F0XDF0	Nuclear pore complex protein.	RNA annealing protein.	0.823
CMQ_1094	CMQ_817	F0XFR7	F0XF01	Nuclear pore complex protein.	Uncharacterized protein.	0.515
CMQ_1094	CMQ_888	F0XFR7	F0XC84	Nuclear pore complex protein.	WD repeat-containing protein.	0.533
CMQ_151	CMQ_1094	F0XR88	F0XFR7	Importin beta-3.	Nuclear pore complex protein.	0.542
CMQ_151	CMQ_5015	F0XR88	F0XKC9	Importin beta-3.	mRNA-nucleus export ATPase.	0.669
CMQ_151	CMQ_701	F0XR88	F0XDF0	Importin beta-3.	RNA annealing protein.	0.937
CMQ_163	CMQ_1094	F0XRJ0	F0XFR7	Uncharacterized protein.	Nuclear pore complex protein.	0.476