23 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_6695	Histone deacetylation protein rxt3. (878 aa)
	CMQ_6935	Histone deacetylase. (1635 aa)
	CMQ_3283	Palmitoyl-protein thioesterase. (332 aa)
	CMQ_3537	Phospholipase/carboxylesterase. (278 aa)
	CMQ_3300	Sir2 family histone deacetylase. (419 aa)
	CMQ_5316	Histone deacetylase superfamily. (380 aa)
	CMQ_788	Histone deacetylase rpd3. (746 aa)
	CMQ_735	Uncharacterized protein. (408 aa)
	CMQ_1407	Phospholipase/carboxylesterase. (297 aa)
	CMQ_5467	Rxt2-like protein. (383 aa)
	CMQ_3033	Chromatin assembly factor 1 subunit. (453 aa)
	CMQ_2244	Yor025wp-like protein. (975 aa)
	CMQ_2263	Acyl-protein thioesterase 1. (241 aa)
	CMQ_8252	Histone deacetylase. (585 aa)
	CMQ_8130	Sir2 family histone deacetylase. (652 aa)
	CMQ_1972	Fas1 domain containing protein. (233 aa)
	CMQ_2024	Transcription factor. (1671 aa)
	CMQ_1906	Uncharacterized protein. (226 aa)
	CMQ_7427	Phd finger domain protein. (1726 aa)
	CMQ_7906	Histone acetylase complex subunit mrg15-2. (307 aa)
	CMQ_4599	WD repeat protein. (615 aa)
	CMQ_4319	Deacetylase complex subunit. (555 aa)
	CMQ_4316	Transcriptional regulatory protein. (762 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1906	CMQ_3033	F0XN10	F0XG71	Uncharacterized protein.	Chromatin assembly factor 1 subunit.	0.855
CMQ_1906	CMQ_4319	F0XN10	F0XTZ4	Uncharacterized protein.	Deacetylase complex subunit.	0.838
CMQ_1906	CMQ_4599	F0XN10	F0XTW9	Uncharacterized protein.	WD repeat protein.	0.655
CMQ_1906	CMQ_5316	F0XN10	F0XB88	Uncharacterized protein.	Histone deacetylase superfamily.	0.814
CMQ_1906	CMQ_6695	F0XN10	F0X7V0	Uncharacterized protein.	Histone deacetylation protein rxt3.	0.477
CMQ_1906	CMQ_6935	F0XN10	F0X801	Uncharacterized protein.	Histone deacetylase.	0.814
CMQ_1906	CMQ_7427	F0XN10	F0XPW1	Uncharacterized protein.	Phd finger domain protein.	0.797
CMQ_1906	CMQ_788	F0XN10	F0XCS5	Uncharacterized protein.	Histone deacetylase rpd3.	0.856
CMQ_1906	CMQ_7906	F0XN10	F0XRT2	Uncharacterized protein.	Histone acetylase complex subunit mrg15-2.	0.730
CMQ_1906	CMQ_8252	F0XN10	F0XKS6	Uncharacterized protein.	Histone deacetylase.	0.856
CMQ_1972	CMQ_2024	F0XN03	F0XN04	Fas1 domain containing protein.	Transcription factor.	0.898
CMQ_1972	CMQ_3033	F0XN03	F0XG71	Fas1 domain containing protein.	Chromatin assembly factor 1 subunit.	0.903
CMQ_1972	CMQ_4316	F0XN03	F0XV01	Fas1 domain containing protein.	Transcriptional regulatory protein.	0.589
CMQ_1972	CMQ_4319	F0XN03	F0XTZ4	Fas1 domain containing protein.	Deacetylase complex subunit.	0.838
CMQ_1972	CMQ_4599	F0XN03	F0XTW9	Fas1 domain containing protein.	WD repeat protein.	0.677
CMQ_1972	CMQ_5316	F0XN03	F0XB88	Fas1 domain containing protein.	Histone deacetylase superfamily.	0.823
CMQ_1972	CMQ_5467	F0XN03	F0XFY0	Fas1 domain containing protein.	Rxt2-like protein.	0.650
CMQ_1972	CMQ_6695	F0XN03	F0X7V0	Fas1 domain containing protein.	Histone deacetylation protein rxt3.	0.683
CMQ_1972	CMQ_6935	F0XN03	F0X801	Fas1 domain containing protein.	Histone deacetylase.	0.823
CMQ_1972	CMQ_7427	F0XN03	F0XPW1	Fas1 domain containing protein.	Phd finger domain protein.	0.927