6 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_888	WD repeat-containing protein. (361 aa)
	CMQ_3284	Tho complex component. (2520 aa)
	CMQ_817	Uncharacterized protein. (218 aa)
	CMQ_2614	Tho complex subunit. (772 aa)
	CMQ_163	Uncharacterized protein. (414 aa)
	CMQ_262	RNA-binding protein. (319 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_163	CMQ_2614	F0XRJ0	F0XH29	Uncharacterized protein.	Tho complex subunit.	0.999
CMQ_163	CMQ_262	F0XRJ0	F0XRJ6	Uncharacterized protein.	RNA-binding protein.	0.874
CMQ_163	CMQ_3284	F0XRJ0	F0X8J1	Uncharacterized protein.	Tho complex component.	0.509
CMQ_163	CMQ_817	F0XRJ0	F0XF01	Uncharacterized protein.	Uncharacterized protein.	0.999
CMQ_163	CMQ_888	F0XRJ0	F0XC84	Uncharacterized protein.	WD repeat-containing protein.	0.999
CMQ_2614	CMQ_163	F0XH29	F0XRJ0	Tho complex subunit.	Uncharacterized protein.	0.999
CMQ_2614	CMQ_262	F0XH29	F0XRJ6	Tho complex subunit.	RNA-binding protein.	0.940
CMQ_2614	CMQ_3284	F0XH29	F0X8J1	Tho complex subunit.	Tho complex component.	0.780
CMQ_2614	CMQ_817	F0XH29	F0XF01	Tho complex subunit.	Uncharacterized protein.	0.999
CMQ_2614	CMQ_888	F0XH29	F0XC84	Tho complex subunit.	WD repeat-containing protein.	0.999
CMQ_262	CMQ_163	F0XRJ6	F0XRJ0	RNA-binding protein.	Uncharacterized protein.	0.874
CMQ_262	CMQ_2614	F0XRJ6	F0XH29	RNA-binding protein.	Tho complex subunit.	0.940
CMQ_262	CMQ_3284	F0XRJ6	F0X8J1	RNA-binding protein.	Tho complex component.	0.824
CMQ_262	CMQ_817	F0XRJ6	F0XF01	RNA-binding protein.	Uncharacterized protein.	0.936
CMQ_262	CMQ_888	F0XRJ6	F0XC84	RNA-binding protein.	WD repeat-containing protein.	0.932
CMQ_3284	CMQ_163	F0X8J1	F0XRJ0	Tho complex component.	Uncharacterized protein.	0.509
CMQ_3284	CMQ_2614	F0X8J1	F0XH29	Tho complex component.	Tho complex subunit.	0.780
CMQ_3284	CMQ_262	F0X8J1	F0XRJ6	Tho complex component.	RNA-binding protein.	0.824
CMQ_3284	CMQ_888	F0X8J1	F0XC84	Tho complex component.	WD repeat-containing protein.	0.828
CMQ_817	CMQ_163	F0XF01	F0XRJ0	Uncharacterized protein.	Uncharacterized protein.	0.999