52 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_6975	37S ribosomal protein S25, mitochondrial. (240 aa)
	CMQ_6866	50S ribosomal protein l24. (268 aa)
	CMQ_6613	50S ribosomal protein mrp49. (206 aa)
	CMQ_6777	Urease accessory protein ureg. (297 aa)
	CMQ_4044	37S ribosomal protein s12. (183 aa)
	CMQ_4136	50S ribosomal protein l4. (263 aa)
	CMQ_3765	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (471 aa)
	CMQ_3755	60S ribosomal protein; Belongs to the universal ribosomal protein uL6 family. (250 aa)
	CMQ_3506	Ribosomal protein. (318 aa)
	CMQ_4020	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (133 aa)
	CMQ_3315	Mitochondrial ribosomal protein s19; Belongs to the universal ribosomal protein uS19 family. (89 aa)
	CMQ_3793	Uncharacterized protein. (201 aa)
	CMQ_5338	Uncharacterized protein. (393 aa)
	CMQ_1120	30S ribosomal protein. (347 aa)
	CMQ_481	Superoxide dismutase. (292 aa)
	CMQ_533	37S ribosomal protein s5; Belongs to the universal ribosomal protein uS5 family. (428 aa)
	CMQ_1321	Mitochondrial large ribosomal subunit. (498 aa)
	CMQ_1590	50S ribosomal protein l4. (339 aa)
	CMQ_1433	40S ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family. (118 aa)
	CMQ_532	Mitochondrial ribosomal protein; Belongs to the universal ribosomal protein uL11 family. (156 aa)
	CMQ_5449	40S ribosomal protein. (390 aa)
	CMQ_3027	37S ribosomal protein. (268 aa)
	CMQ_3082	Zinc finger protein gcs1. (386 aa)
	CMQ_3260	50S ribosomal protein 27. (105 aa)
	CMQ_3064	Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family. (361 aa)
	CMQ_2712	30S ribosomal subunit. (450 aa)
	CMQ_3257	60S ribosomal protein l3. (471 aa)
	CMQ_2078	50S ribosomal protein l13. (183 aa)
	CMQ_8217	Mitochondrial ribosomal protein l44. (98 aa)
	CMQ_8229	60S ribosomal protein. (170 aa)
	CMQ_6430	60S ribosomal protein. (245 aa)
	CMQ_6084	37S ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family. (348 aa)
	CMQ_6250	IGR domain-containing protein. (273 aa)
	CMQ_6400	50S ribosomal protein. (199 aa)
	CMQ_6106	50S ribosomal protein l2. (402 aa)
	CMQ_7601	Mitochondrial large ribosomal subunit. (245 aa)
	CMQ_7128	50S ribosomal protein l14; Belongs to the universal ribosomal protein uL14 family. (130 aa)
	CMQ_7150	Uncharacterized protein. (241 aa)
	CMQ_224	Mitochondrial ribosomal protein. (475 aa)
	CMQ_94	50S ribosomal subunit. (352 aa)
	CMQ_7959	Uncharacterized protein. (250 aa)
	CMQ_7952	50S ribosomal subunit l30. (367 aa)
	CMQ_7922	Mitochondrial ribosomal protein. (137 aa)
	CMQ_7898	40S ribosomal protein s8. (163 aa)
	CMQ_8006	37S ribosomal protein. (272 aa)
	CMQ_5748	37S ribosomal protein. (387 aa)
	CMQ_5698	50S ribosomal protein l17; Belongs to the bacterial ribosomal protein bL17 family. (247 aa)
	CMQ_4440	Kow motif domain containing protein. (391 aa)
	CMQ_4265	50S ribosomal protein l3. (376 aa)
	CMQ_4905	Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL16 family. (293 aa)
	CMQ_4270	Mitochondrial ribosomal protein. (247 aa)
	CMQ_4393	Mitochondrial ribosomal protein. (244 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1120	CMQ_1321	F0XBX7	F0XE94	30S ribosomal protein.	Mitochondrial large ribosomal subunit.	0.925
CMQ_1120	CMQ_1433	F0XBX7	F0XEN9	30S ribosomal protein.	40S ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family.	0.990
CMQ_1120	CMQ_1590	F0XBX7	F0XE97	30S ribosomal protein.	50S ribosomal protein l4.	0.994
CMQ_1120	CMQ_2078	F0XBX7	F0XIW5	30S ribosomal protein.	50S ribosomal protein l13.	0.989
CMQ_1120	CMQ_224	F0XBX7	F0XRC3	30S ribosomal protein.	Mitochondrial ribosomal protein.	0.999
CMQ_1120	CMQ_2712	F0XBX7	F0XHV0	30S ribosomal protein.	30S ribosomal subunit.	0.989
CMQ_1120	CMQ_3027	F0XBX7	F0XGL9	30S ribosomal protein.	37S ribosomal protein.	0.984
CMQ_1120	CMQ_3064	F0XBX7	F0XHQ9	30S ribosomal protein.	Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family.	0.978
CMQ_1120	CMQ_3257	F0XBX7	F0XI02	30S ribosomal protein.	60S ribosomal protein l3.	0.919
CMQ_1120	CMQ_3260	F0XBX7	F0XHN0	30S ribosomal protein.	50S ribosomal protein 27.	0.922
CMQ_1120	CMQ_3315	F0XBX7	F0XAN9	30S ribosomal protein.	Mitochondrial ribosomal protein s19; Belongs to the universal ribosomal protein uS19 family.	0.954
CMQ_1120	CMQ_3506	F0XBX7	F0XA74	30S ribosomal protein.	Ribosomal protein.	0.999
CMQ_1120	CMQ_3755	F0XBX7	F0X9M9	30S ribosomal protein.	60S ribosomal protein; Belongs to the universal ribosomal protein uL6 family.	0.979
CMQ_1120	CMQ_3793	F0XBX7	F0XAQ8	30S ribosomal protein.	Uncharacterized protein.	0.921
CMQ_1120	CMQ_4020	F0XBX7	F0XAB1	30S ribosomal protein.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.994
CMQ_1120	CMQ_4044	F0XBX7	F0X844	30S ribosomal protein.	37S ribosomal protein s12.	0.999
CMQ_1120	CMQ_4136	F0XBX7	F0X8X7	30S ribosomal protein.	50S ribosomal protein l4.	0.967
CMQ_1120	CMQ_4265	F0XBX7	F0XTT1	30S ribosomal protein.	50S ribosomal protein l3.	0.988
CMQ_1120	CMQ_4270	F0XBX7	F0XUE5	30S ribosomal protein.	Mitochondrial ribosomal protein.	0.988
CMQ_1120	CMQ_4393	F0XBX7	F0XUU5	30S ribosomal protein.	Mitochondrial ribosomal protein.	0.933