21 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_3082	Zinc finger protein gcs1. (386 aa)
	CMQ_5748	37S ribosomal protein. (387 aa)
	CMQ_8006	37S ribosomal protein. (272 aa)
	CMQ_7898	40S ribosomal protein s8. (163 aa)
	CMQ_224	Mitochondrial ribosomal protein. (475 aa)
	CMQ_6250	IGR domain-containing protein. (273 aa)
	CMQ_6084	37S ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family. (348 aa)
	CMQ_2712	30S ribosomal subunit. (450 aa)
	CMQ_3027	37S ribosomal protein. (268 aa)
	CMQ_5449	40S ribosomal protein. (390 aa)
	CMQ_1433	40S ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family. (118 aa)
	CMQ_533	37S ribosomal protein s5; Belongs to the universal ribosomal protein uS5 family. (428 aa)
	CMQ_481	Superoxide dismutase. (292 aa)
	CMQ_1120	30S ribosomal protein. (347 aa)
	CMQ_5338	Uncharacterized protein. (393 aa)
	CMQ_3793	Uncharacterized protein. (201 aa)
	CMQ_3315	Mitochondrial ribosomal protein s19; Belongs to the universal ribosomal protein uS19 family. (89 aa)
	CMQ_3506	Ribosomal protein. (318 aa)
	CMQ_3765	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (471 aa)
	CMQ_4044	37S ribosomal protein s12. (183 aa)
	CMQ_6975	37S ribosomal protein S25, mitochondrial. (240 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1120	CMQ_1433	F0XBX7	F0XEN9	30S ribosomal protein.	40S ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family.	0.990
CMQ_1120	CMQ_224	F0XBX7	F0XRC3	30S ribosomal protein.	Mitochondrial ribosomal protein.	0.999
CMQ_1120	CMQ_2712	F0XBX7	F0XHV0	30S ribosomal protein.	30S ribosomal subunit.	0.989
CMQ_1120	CMQ_3027	F0XBX7	F0XGL9	30S ribosomal protein.	37S ribosomal protein.	0.984
CMQ_1120	CMQ_3315	F0XBX7	F0XAN9	30S ribosomal protein.	Mitochondrial ribosomal protein s19; Belongs to the universal ribosomal protein uS19 family.	0.954
CMQ_1120	CMQ_3506	F0XBX7	F0XA74	30S ribosomal protein.	Ribosomal protein.	0.999
CMQ_1120	CMQ_3793	F0XBX7	F0XAQ8	30S ribosomal protein.	Uncharacterized protein.	0.921
CMQ_1120	CMQ_4044	F0XBX7	F0X844	30S ribosomal protein.	37S ribosomal protein s12.	0.999
CMQ_1120	CMQ_481	F0XBX7	F0XD85	30S ribosomal protein.	Superoxide dismutase.	0.935
CMQ_1120	CMQ_533	F0XBX7	F0XDF6	30S ribosomal protein.	37S ribosomal protein s5; Belongs to the universal ribosomal protein uS5 family.	0.999
CMQ_1120	CMQ_5338	F0XBX7	F0XBU4	30S ribosomal protein.	Uncharacterized protein.	0.925
CMQ_1120	CMQ_5449	F0XBX7	F0XG07	30S ribosomal protein.	40S ribosomal protein.	0.999
CMQ_1120	CMQ_5748	F0XBX7	F0XSK6	30S ribosomal protein.	37S ribosomal protein.	0.980
CMQ_1120	CMQ_6084	F0XBX7	F0XLU0	30S ribosomal protein.	37S ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family.	0.999
CMQ_1120	CMQ_6250	F0XBX7	F0XMB2	30S ribosomal protein.	IGR domain-containing protein.	0.616
CMQ_1120	CMQ_6975	F0XBX7	F0X6V0	30S ribosomal protein.	37S ribosomal protein S25, mitochondrial.	0.936
CMQ_1120	CMQ_7898	F0XBX7	F0XS90	30S ribosomal protein.	40S ribosomal protein s8.	0.990
CMQ_1120	CMQ_8006	F0XBX7	F0XSE5	30S ribosomal protein.	37S ribosomal protein.	0.993
CMQ_1433	CMQ_1120	F0XEN9	F0XBX7	40S ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family.	30S ribosomal protein.	0.990
CMQ_1433	CMQ_224	F0XEN9	F0XRC3	40S ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family.	Mitochondrial ribosomal protein.	0.913