4 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_4599	WD repeat protein. (615 aa)
	CMQ_1740	Uncharacterized protein. (426 aa)
	CMQ_6737	Myb DNA-binding domain containing protein. (2358 aa)
	CMQ_8252	Histone deacetylase. (585 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1740	CMQ_4599	F0XFJ3	F0XTW9	Uncharacterized protein.	WD repeat protein.	0.964
CMQ_1740	CMQ_6737	F0XFJ3	F0X6X0	Uncharacterized protein.	Myb DNA-binding domain containing protein.	0.963
CMQ_1740	CMQ_8252	F0XFJ3	F0XKS6	Uncharacterized protein.	Histone deacetylase.	0.772
CMQ_4599	CMQ_1740	F0XTW9	F0XFJ3	WD repeat protein.	Uncharacterized protein.	0.964
CMQ_4599	CMQ_6737	F0XTW9	F0X6X0	WD repeat protein.	Myb DNA-binding domain containing protein.	0.978
CMQ_4599	CMQ_8252	F0XTW9	F0XKS6	WD repeat protein.	Histone deacetylase.	0.922
CMQ_6737	CMQ_1740	F0X6X0	F0XFJ3	Myb DNA-binding domain containing protein.	Uncharacterized protein.	0.963
CMQ_6737	CMQ_4599	F0X6X0	F0XTW9	Myb DNA-binding domain containing protein.	WD repeat protein.	0.978
CMQ_6737	CMQ_8252	F0X6X0	F0XKS6	Myb DNA-binding domain containing protein.	Histone deacetylase.	0.909
CMQ_8252	CMQ_1740	F0XKS6	F0XFJ3	Histone deacetylase.	Uncharacterized protein.	0.772
CMQ_8252	CMQ_4599	F0XKS6	F0XTW9	Histone deacetylase.	WD repeat protein.	0.922
CMQ_8252	CMQ_6737	F0XKS6	F0X6X0	Histone deacetylase.	Myb DNA-binding domain containing protein.	0.909