121 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_1445	Ribosomal protein l26. (136 aa)
	CMQ_4782	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (238 aa)
	CMQ_4393	Mitochondrial ribosomal protein. (244 aa)
	CMQ_4270	Mitochondrial ribosomal protein. (247 aa)
	CMQ_4812	40S ribosomal protein s22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	CMQ_4480	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (147 aa)
	CMQ_4905	Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL16 family. (293 aa)
	CMQ_4265	50S ribosomal protein l3. (376 aa)
	CMQ_4440	Kow motif domain containing protein. (391 aa)
	CMQ_4378	60S ribosomal protein l27e. (135 aa)
	CMQ_5647	Ribosomal protein l14. (165 aa)
	CMQ_5621	60S ribosomal protein l31. (119 aa)
	CMQ_5698	50S ribosomal protein l17; Belongs to the bacterial ribosomal protein bL17 family. (247 aa)
	CMQ_5748	37S ribosomal protein. (387 aa)
	CMQ_5705	60S ribosomal protein l18. (185 aa)
	CMQ_8006	37S ribosomal protein. (272 aa)
	CMQ_7898	40S ribosomal protein s8. (163 aa)
	CMQ_7922	Mitochondrial ribosomal protein. (137 aa)
	CMQ_7952	50S ribosomal subunit l30. (367 aa)
	CMQ_7770	60S ribosomal protein l37a. (92 aa)
	CMQ_7947	Uncharacterized protein. (353 aa)
	CMQ_7856	40S ribosomal protein s11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	CMQ_7900	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
	CMQ_7874	60S ribosomal protein l33. (109 aa)
	CMQ_7959	Uncharacterized protein. (250 aa)
	CMQ_7820	60S acidic ribosomal protein p2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
	CMQ_7760	40S ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family. (152 aa)
	CMQ_5470	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (136 aa)
	CMQ_94	50S ribosomal subunit. (352 aa)
	CMQ_224	Mitochondrial ribosomal protein. (475 aa)
	CMQ_205	Ribosome biogenesis GTPase. (670 aa)
	CMQ_109	40S ribosomal protein s19. (151 aa)
	CMQ_216	Uncharacterized protein. (648 aa)
	CMQ_177	40S ribosomal protein s14; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	CMQ_140	60S ribosomal protein l11; Belongs to the universal ribosomal protein uL5 family. (171 aa)
	CMQ_7150	Uncharacterized protein. (241 aa)
	CMQ_7352	60S ribosomal protein l23. (152 aa)
	CMQ_7652	60S ribosomal protein l28. (152 aa)
	CMQ_7182	60S ribosomal protein l16; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	CMQ_7128	50S ribosomal protein l14; Belongs to the universal ribosomal protein uL14 family. (130 aa)
	CMQ_7601	Mitochondrial large ribosomal subunit. (245 aa)
	CMQ_7559	60S ribosomal protein; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	CMQ_2049	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (174 aa)
	CMQ_6436	Uncharacterized protein. (413 aa)
	CMQ_5939	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)
	CMQ_6106	50S ribosomal protein l2. (402 aa)
	CMQ_6403	Uncharacterized protein. (561 aa)
	CMQ_6400	50S ribosomal protein. (199 aa)
	CMQ_6250	IGR domain-containing protein. (273 aa)
	CMQ_6111	60S ribosomal protein l12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	CMQ_6199	40S ribosomal protein. (112 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (450 aa)
	CMQ_6116	60S ribosomal protein. (356 aa)
	CMQ_6084	37S ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family. (348 aa)
	CMQ_6430	60S ribosomal protein. (245 aa)
	CMQ_8301	Fungal specific transcription factor domain containing protein. (1838 aa)
	CMQ_8229	60S ribosomal protein. (170 aa)
	CMQ_8217	Mitochondrial ribosomal protein l44. (98 aa)
	CMQ_5090	60S ribosomal protein l24a. (160 aa)
	CMQ_4969	Ribosomal protein s5; Belongs to the universal ribosomal protein uS5 family. (264 aa)
	CMQ_2336	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (202 aa)
	CMQ_2405	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (63 aa)
	CMQ_2477	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (205 aa)
	CMQ_2259	40S ribosomal protein s16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	CMQ_2078	50S ribosomal protein l13. (183 aa)
	CMQ_2339	60S ribosomal protein l34. (116 aa)
	CMQ_5883	60S ribosomal protein l35. (124 aa)
	CMQ_5869	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (200 aa)
	CMQ_3257	60S ribosomal protein l3. (471 aa)
	CMQ_2712	30S ribosomal subunit. (450 aa)
	CMQ_2692	Uncharacterized protein. (273 aa)
	CMQ_3064	Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family. (361 aa)
	CMQ_2834	Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
	CMQ_3260	50S ribosomal protein 27. (105 aa)
	CMQ_2737	60S ribosomal protein l2. (254 aa)
	CMQ_2865	60S ribosomal protein l32. (131 aa)
	CMQ_3096	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (104 aa)
	CMQ_3207	60S ribosomal protein l10. (219 aa)
	CMQ_3246	60S ribosomal protein. (110 aa)
	CMQ_3082	Zinc finger protein gcs1. (386 aa)
	CMQ_3027	37S ribosomal protein. (268 aa)
	CMQ_3004	60S ribosomal protein l22. (124 aa)
	CMQ_5431	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (118 aa)
	CMQ_5418	Ubiquitin. (97 aa)
	CMQ_5449	40S ribosomal protein. (390 aa)
	CMQ_532	Mitochondrial ribosomal protein; Belongs to the universal ribosomal protein uL11 family. (156 aa)
	CMQ_1433	40S ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family. (118 aa)
	CMQ_579	Eukaryotic translation initiation factor subunit. (727 aa)
	CMQ_1067	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family. (79 aa)
	CMQ_1590	50S ribosomal protein l4. (339 aa)
	CMQ_1321	Mitochondrial large ribosomal subunit. (498 aa)
	CMQ_994	60S ribosomal protein. (192 aa)
	CMQ_1675	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (200 aa)
	CMQ_533	37S ribosomal protein s5; Belongs to the universal ribosomal protein uS5 family. (428 aa)
	CMQ_481	Superoxide dismutase. (292 aa)
	CMQ_1716	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (203 aa)
	CMQ_633	60S ribosomal protein l23; Belongs to the universal ribosomal protein uL14 family. (139 aa)
	CMQ_491	60S ribosomal protein l5. (301 aa)
	CMQ_1120	30S ribosomal protein. (347 aa)
	CMQ_5338	Uncharacterized protein. (393 aa)
	CMQ_5335	60S ribosomal protein. (160 aa)
	CMQ_5325	40S ribosomal protein s9; Belongs to the universal ribosomal protein uS4 family. (191 aa)
	CMQ_3793	Uncharacterized protein. (201 aa)
	CMQ_3315	Mitochondrial ribosomal protein s19; Belongs to the universal ribosomal protein uS19 family. (89 aa)
	CMQ_3824	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	CMQ_4020	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (133 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (296 aa)
	CMQ_3506	Ribosomal protein. (318 aa)
	CMQ_3755	60S ribosomal protein; Belongs to the universal ribosomal protein uL6 family. (250 aa)
	CMQ_3765	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (471 aa)
	CMQ_3662	BZIP domain-containing protein. (281 aa)
	CMQ_4136	50S ribosomal protein l4. (263 aa)
	CMQ_3500	40S ribosomal protein s17. (148 aa)
	CMQ_4044	37S ribosomal protein s12. (183 aa)
	CMQ_6777	Urease accessory protein ureg. (297 aa)
	CMQ_6557	40S ribosomal protein s10b. (165 aa)
	CMQ_6613	50S ribosomal protein mrp49. (206 aa)
	CMQ_6866	50S ribosomal protein l24. (268 aa)
	CMQ_6984	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (97 aa)
	CMQ_6975	37S ribosomal protein S25, mitochondrial. (240 aa)
	CMQ_6964	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (204 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1067	CMQ_109	F0XEC3	F0XR29	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	40S ribosomal protein s19.	0.997
CMQ_1067	CMQ_1120	F0XEC3	F0XBX7	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	30S ribosomal protein.	0.981
CMQ_1067	CMQ_140	F0XEC3	F0XQL5	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	60S ribosomal protein l11; Belongs to the universal ribosomal protein uL5 family.	0.999
CMQ_1067	CMQ_1433	F0XEC3	F0XEN9	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	40S ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family.	0.983
CMQ_1067	CMQ_1445	F0XEC3	F0XD55	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	Ribosomal protein l26.	0.999
CMQ_1067	CMQ_1590	F0XEC3	F0XE97	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	50S ribosomal protein l4.	0.954
CMQ_1067	CMQ_1675	F0XEC3	F0XDN5	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
CMQ_1067	CMQ_1716	F0XEC3	F0XD69	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
CMQ_1067	CMQ_177	F0XEC3	F0XR11	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	40S ribosomal protein s14; Belongs to the universal ribosomal protein uS11 family.	0.999
CMQ_1067	CMQ_2049	F0XEC3	F0XN55	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.998
CMQ_1067	CMQ_205	F0XEC3	F0XRB3	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	Ribosome biogenesis GTPase.	0.910
CMQ_1067	CMQ_2078	F0XEC3	F0XIW5	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	50S ribosomal protein l13.	0.992
CMQ_1067	CMQ_216	F0XEC3	F0XR28	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	Uncharacterized protein.	0.986
CMQ_1067	CMQ_2259	F0XEC3	F0XIX1	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	40S ribosomal protein s16; Belongs to the universal ribosomal protein uS9 family.	0.999
CMQ_1067	CMQ_2336	F0XEC3	F0XJS4	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.998
CMQ_1067	CMQ_2339	F0XEC3	F0XIW1	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	60S ribosomal protein l34.	0.999
CMQ_1067	CMQ_2405	F0XEC3	F0XJP6	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
CMQ_1067	CMQ_2477	F0XEC3	F0XJD4	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
CMQ_1067	CMQ_2692	F0XEC3	F0XHR7	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	Uncharacterized protein.	0.993
CMQ_1067	CMQ_2712	F0XEC3	F0XHV0	60S ribosomal protein; Belongs to the eukaryotic ribosomal protein eL38 family.	30S ribosomal subunit.	0.982