(9 nodes) PIN-like domain superfamily network (Grosmannia clavigera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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co-expression

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Your Input:
	FEN1	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (856 aa)
	CMQ_4713	DNA excision repair protein rad2. (1287 aa)
	CMQ_7958	Protein phosphatase; Belongs to the PP2C family. (672 aa)
	CMQ_8304	Exosome complex exonuclease exoribonuclease; Belongs to the RNR ribonuclease family. (1030 aa)
	CMQ_2754	Duf652 domain containing protein. (170 aa)
	CMQ_2934	Xpg i-region protein. (731 aa)
	CMQ_4105	Flap structure-specific endonuclease. (749 aa)
	CMQ_1296	DNA replication initiation factor cdc45. (1519 aa)
	CMQ_654	Exodeoxyribonuclease 1. (805 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1296	CMQ_4105	F0XFL3	F0XA50	DNA replication initiation factor cdc45.	Flap structure-specific endonuclease.	0.445
CMQ_1296	CMQ_4713	F0XFL3	F0XU78	DNA replication initiation factor cdc45.	DNA excision repair protein rad2.	0.445
CMQ_1296	CMQ_654	F0XFL3	F0XEI8	DNA replication initiation factor cdc45.	Exodeoxyribonuclease 1.	0.902
CMQ_1296	FEN1	F0XFL3	F0XG13	DNA replication initiation factor cdc45.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.632
CMQ_2754	CMQ_7958	F0XHA6	F0XSC7	Duf652 domain containing protein.	Protein phosphatase; Belongs to the PP2C family.	0.874
CMQ_4105	CMQ_1296	F0XA50	F0XFL3	Flap structure-specific endonuclease.	DNA replication initiation factor cdc45.	0.445
CMQ_4105	CMQ_654	F0XA50	F0XEI8	Flap structure-specific endonuclease.	Exodeoxyribonuclease 1.	0.710
CMQ_4105	FEN1	F0XA50	F0XG13	Flap structure-specific endonuclease.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.716
CMQ_4713	CMQ_1296	F0XU78	F0XFL3	DNA excision repair protein rad2.	DNA replication initiation factor cdc45.	0.445
CMQ_4713	CMQ_654	F0XU78	F0XEI8	DNA excision repair protein rad2.	Exodeoxyribonuclease 1.	0.463
CMQ_4713	FEN1	F0XU78	F0XG13	DNA excision repair protein rad2.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.600
CMQ_654	CMQ_1296	F0XEI8	F0XFL3	Exodeoxyribonuclease 1.	DNA replication initiation factor cdc45.	0.902
CMQ_654	CMQ_4105	F0XEI8	F0XA50	Exodeoxyribonuclease 1.	Flap structure-specific endonuclease.	0.710
CMQ_654	CMQ_4713	F0XEI8	F0XU78	Exodeoxyribonuclease 1.	DNA excision repair protein rad2.	0.463
CMQ_654	FEN1	F0XEI8	F0XG13	Exodeoxyribonuclease 1.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.871
CMQ_7958	CMQ_2754	F0XSC7	F0XHA6	Protein phosphatase; Belongs to the PP2C family.	Duf652 domain containing protein.	0.874
FEN1	CMQ_1296	F0XG13	F0XFL3	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	DNA replication initiation factor cdc45.	0.632
FEN1	CMQ_4105	F0XG13	F0XA50	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	Flap structure-specific endonuclease.	0.716
FEN1	CMQ_4713	F0XG13	F0XU78	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	DNA excision repair protein rad2.	0.600
FEN1	CMQ_654	F0XG13	F0XEI8	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	Exodeoxyribonuclease 1.	0.871