22 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_5600	Nuclear pore complex subunit. (1392 aa)
	CMQ_6525	Nuclear envelope protein. (670 aa)
	CMQ_3545	Tpr domain containing, filament-forming protein. (2425 aa)
	CMQ_3933	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1028 aa)
	CMQ_3559	Nuclear pore complex subunit. (1563 aa)
	CMQ_3557	WD repeat protein. (425 aa)
	CMQ_713	Nucleoporin nup189. (2021 aa)
	CMQ_464	Cleavage and polyadenylylation specificity factor subunit. (405 aa)
	CMQ_701	RNA annealing protein. (251 aa)
	CMQ_441	Uncharacterized protein. (1323 aa)
	CMQ_1094	Nuclear pore complex protein. (358 aa)
	CMQ_2605	Nucleoporin. (2370 aa)
	CMQ_2879	Uncharacterized protein. (967 aa)
	CMQ_3119	Ran-specific GTPase-activating protein. (244 aa)
	CMQ_3114	mRNA export factor mex67. (645 aa)
	CMQ_5895	Nucleoporin. (1320 aa)
	CMQ_5082	Nup57-like nuclear pore protein. (329 aa)
	CMQ_4597	Nuclear pore protein. (1153 aa)
	CMQ_8153	Nucleoporin. (679 aa)
	CMQ_7223	Uncharacterized protein. (914 aa)
	CMQ_262	RNA-binding protein. (319 aa)
	CMQ_7912	Nuclear pore complex subunit. (1686 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMQ_1094	CMQ_2605	F0XFR7	F0XGX4	Nuclear pore complex protein.	Nucleoporin.	0.876
CMQ_1094	CMQ_262	F0XFR7	F0XRJ6	Nuclear pore complex protein.	RNA-binding protein.	0.789
CMQ_1094	CMQ_3114	F0XFR7	F0XI66	Nuclear pore complex protein.	mRNA export factor mex67.	0.987
CMQ_1094	CMQ_3119	F0XFR7	F0XHK7	Nuclear pore complex protein.	Ran-specific GTPase-activating protein.	0.772
CMQ_1094	CMQ_3545	F0XFR7	F0X931	Nuclear pore complex protein.	Tpr domain containing, filament-forming protein.	0.990
CMQ_1094	CMQ_3559	F0XFR7	F0X9F0	Nuclear pore complex protein.	Nuclear pore complex subunit.	0.987
CMQ_1094	CMQ_3933	F0XFR7	F0X9B9	Nuclear pore complex protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.867
CMQ_1094	CMQ_4597	F0XFR7	F0XTQ9	Nuclear pore complex protein.	Nuclear pore protein.	0.989
CMQ_1094	CMQ_5082	F0XFR7	F0XK96	Nuclear pore complex protein.	Nup57-like nuclear pore protein.	0.909
CMQ_1094	CMQ_5600	F0XFR7	F0XSJ6	Nuclear pore complex protein.	Nuclear pore complex subunit.	0.832
CMQ_1094	CMQ_5895	F0XFR7	F0XIN4	Nuclear pore complex protein.	Nucleoporin.	0.991
CMQ_1094	CMQ_6525	F0XFR7	F0X7F4	Nuclear pore complex protein.	Nuclear envelope protein.	0.609
CMQ_1094	CMQ_701	F0XFR7	F0XDF0	Nuclear pore complex protein.	RNA annealing protein.	0.823
CMQ_1094	CMQ_713	F0XFR7	F0XBY7	Nuclear pore complex protein.	Nucleoporin nup189.	0.999
CMQ_1094	CMQ_7223	F0XFR7	F0XPV9	Nuclear pore complex protein.	Uncharacterized protein.	0.772
CMQ_1094	CMQ_7912	F0XFR7	F0XS94	Nuclear pore complex protein.	Nuclear pore complex subunit.	0.894
CMQ_1094	CMQ_8153	F0XFR7	F0XKK4	Nuclear pore complex protein.	Nucleoporin.	0.878
CMQ_2605	CMQ_1094	F0XGX4	F0XFR7	Nucleoporin.	Nuclear pore complex protein.	0.876
CMQ_2605	CMQ_262	F0XGX4	F0XRJ6	Nucleoporin.	RNA-binding protein.	0.495
CMQ_2605	CMQ_3114	F0XGX4	F0XI66	Nucleoporin.	mRNA export factor mex67.	0.483