34 items (Grosmannia clavigera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CMQ_4942	Arginine serine-rich protein. (332 aa)
	CMQ_8237	Pre-RNA splicing factor. (398 aa)
	CMQ_6147	DNA-binding protein. (312 aa)
	CMQ_8111	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	CMQ_1878	Cfia complex component. (1117 aa)
	CMQ_163	Uncharacterized protein. (414 aa)
	CMQ_8008	mRNA splicing factor RNA helicase. (1500 aa)
	CMQ_5770	Cleavage and polyadenylation specific factor 5. (265 aa)
	CMQ_5517	Uncharacterized protein. (171 aa)
	CMQ_5594	Rnp domain containing protein. (194 aa)
	CMQ_5682	Uncharacterized protein. (555 aa)
	CMQ_4682	mRNA cleavage factor complex component. (867 aa)
	CMQ_4896	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (596 aa)
	CMQ_1425	GTP-binding protein. (311 aa)
	CMQ_435	Beta-glucanase. (371 aa)
	CMQ_1355	Small nuclear ribonucleoprotein G. (86 aa)
	CMQ_464	Cleavage and polyadenylylation specificity factor subunit. (405 aa)
	CMQ_888	WD repeat-containing protein. (361 aa)
	CMQ_5164	mRNA splicing factor. (502 aa)
	CMQ_4025	mRNA splicing factor. (542 aa)
	CLP1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (481 aa)
	CMQ_6548	R3h domain protein. (662 aa)
	CMQ_1095	Zinc finger DNA-binding protein. (374 aa)
	CMQ_1147	Uncharacterized protein. (607 aa)
	CMQ_460	Fungal transcriptional regulatory protein. (644 aa)
	CMQ_1446	Nucleic acid-binding protein. (306 aa)
	CMQ_817	Uncharacterized protein. (218 aa)
	CMQ_2667	G-patch domain containing protein. (370 aa)
	CMQ_2614	Tho complex subunit. (772 aa)
	CMQ_2683	U2 auxiliary factor small. (208 aa)
	CMQ_3187	Pwi domain protein mRNA processing. (209 aa)
	CMQ_2079	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
	CMQ_2300	Geranylgeranyl pyrophosphate synthetase. (369 aa)
	CMQ_5084	Small nuclear ribonucleoprotein. (119 aa)

Your Current Organism:

Grosmannia clavigera

NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLP1	CMQ_1095	F0X8B9	F0XDR1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Zinc finger DNA-binding protein.	0.594
CLP1	CMQ_1147	F0X8B9	F0XEH5	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.593
CLP1	CMQ_1446	F0X8B9	F0XET5	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Nucleic acid-binding protein.	0.593
CLP1	CMQ_163	F0X8B9	F0XRJ0	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.653
CLP1	CMQ_1878	F0X8B9	F0XNE6	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Cfia complex component.	0.930
CLP1	CMQ_2300	F0X8B9	F0XJR4	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Geranylgeranyl pyrophosphate synthetase.	0.871
CLP1	CMQ_2667	F0X8B9	F0XH24	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	G-patch domain containing protein.	0.594
CLP1	CMQ_460	F0X8B9	F0XEL1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Fungal transcriptional regulatory protein.	0.594
CLP1	CMQ_464	F0X8B9	F0XCB7	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Cleavage and polyadenylylation specificity factor subunit.	0.934
CLP1	CMQ_4682	F0X8B9	F0XTQ3	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	mRNA cleavage factor complex component.	0.999
CLP1	CMQ_4896	F0X8B9	F0XUD1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.799
CLP1	CMQ_4942	F0X8B9	F0XKC6	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Arginine serine-rich protein.	0.692
CLP1	CMQ_5517	F0X8B9	F0XSK1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.871
CLP1	CMQ_5594	F0X8B9	F0XSL1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Rnp domain containing protein.	0.633
CLP1	CMQ_5770	F0X8B9	F0XSG7	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Cleavage and polyadenylation specific factor 5.	0.841
CLP1	CMQ_6147	F0X8B9	F0XME1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	DNA-binding protein.	0.653
CLP1	CMQ_6548	F0X8B9	F0X755	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	R3h domain protein.	0.871
CLP1	CMQ_8008	F0X8B9	F0XSD8	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	mRNA splicing factor RNA helicase.	0.645
CLP1	CMQ_817	F0X8B9	F0XF01	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.668
CLP1	CMQ_8237	F0X8B9	F0XKF8	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Pre-RNA splicing factor.	0.789