STRINGSTRING
CMQ_4896 CMQ_4896 CMQ_6548 CMQ_6548 CLP1 CLP1 CMQ_3724 CMQ_3724 CMQ_4833 CMQ_4833 CMQ_464 CMQ_464 CMQ_862 CMQ_862 CMQ_1355 CMQ_1355 CMQ_1425 CMQ_1425 CMQ_1240 CMQ_1240 CMQ_5434 CMQ_5434 CMQ_2933 CMQ_2933 CMQ_2079 CMQ_2079 CMQ_2300 CMQ_2300 CMQ_5084 CMQ_5084 CMQ_8111 CMQ_8111 CMQ_1878 CMQ_1878 CMQ_7129 CMQ_7129 CMQ_338 CMQ_338 CMQ_5770 CMQ_5770 CMQ_5517 CMQ_5517 CMQ_5594 CMQ_5594 CMQ_4682 CMQ_4682
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CMQ_4896Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (596 aa)
CMQ_6548R3h domain protein. (662 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (481 aa)
CMQ_3724Cleavage and polyadenylation specificity factor subunit. (857 aa)
CMQ_4833mRNA cleavage and polyadenylation specificity factor complex subunit. (821 aa)
CMQ_464Cleavage and polyadenylylation specificity factor subunit. (405 aa)
CMQ_862Cleavage and polyadenylation specificity factor subunit. (1461 aa)
CMQ_1355Small nuclear ribonucleoprotein G. (86 aa)
CMQ_1425GTP-binding protein. (311 aa)
CMQ_1240mRNA cleavage and polyadenylation specificity factor complex subunit. (702 aa)
CMQ_5434Cleavage and polyadenylation specificity factor subunit 2. (1036 aa)
CMQ_2933Nuclear cap-binding protein subunit 2. (218 aa)
CMQ_2079Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
CMQ_2300Geranylgeranyl pyrophosphate synthetase. (369 aa)
CMQ_5084Small nuclear ribonucleoprotein. (119 aa)
CMQ_8111Small nuclear ribonucleoprotein Sm D3. (116 aa)
CMQ_1878Cfia complex component. (1117 aa)
CMQ_7129WD repeat protein. (581 aa)
CMQ_338Cap-binding protein. (868 aa)
CMQ_5770Cleavage and polyadenylation specific factor 5. (265 aa)
CMQ_5517Uncharacterized protein. (171 aa)
CMQ_5594Rnp domain containing protein. (194 aa)
CMQ_4682mRNA cleavage factor complex component. (867 aa)
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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