(5 nodes) Mixed, incl. Positive regulation of sporulation, and Dimerisation and cyclophilin-binding domain of Mon2 network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G9F5_TUBMM	Uncharacterized protein. (1667 aa)
	D5G9K6_TUBMM	NMT1 domain-containing protein. (287 aa)
	D5GAZ3_TUBMM	Dopey_N domain-containing protein. (1800 aa)
	D5GDF4_TUBMM	Uncharacterized protein. (2036 aa)
	D5GFY1_TUBMM	Uncharacterized protein. (266 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G9F5_TUBMM	D5GAZ3_TUBMM	D5G9F5	D5GAZ3	Uncharacterized protein.	Dopey_N domain-containing protein.	0.987
D5G9F5_TUBMM	D5GDF4_TUBMM	D5G9F5	D5GDF4	Uncharacterized protein.	Uncharacterized protein.	0.458
D5G9K6_TUBMM	D5GFY1_TUBMM	D5G9K6	D5GFY1	NMT1 domain-containing protein.	Uncharacterized protein.	0.613
D5GAZ3_TUBMM	D5G9F5_TUBMM	D5GAZ3	D5G9F5	Dopey_N domain-containing protein.	Uncharacterized protein.	0.987
D5GAZ3_TUBMM	D5GFY1_TUBMM	D5GAZ3	D5GFY1	Dopey_N domain-containing protein.	Uncharacterized protein.	0.530
D5GDF4_TUBMM	D5G9F5_TUBMM	D5GDF4	D5G9F5	Uncharacterized protein.	Uncharacterized protein.	0.458
D5GFY1_TUBMM	D5G9K6_TUBMM	D5GFY1	D5G9K6	Uncharacterized protein.	NMT1 domain-containing protein.	0.613
D5GFY1_TUBMM	D5GAZ3_TUBMM	D5GFY1	D5GAZ3	Uncharacterized protein.	Dopey_N domain-containing protein.	0.530