(12 nodes) Proteasome accessory complex network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G4M1_TUBMM	AAA domain-containing protein; Belongs to the AAA ATPase family. (389 aa)
	D5G8F9_TUBMM	MPN domain-containing protein. (331 aa)
	D5G956_TUBMM	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (902 aa)
	D5GB69_TUBMM	PCI domain-containing protein. (261 aa)
	D5GBE1_TUBMM	VWFA domain-containing protein. (298 aa)
	D5GGP4_TUBMM	PCI domain-containing protein. (382 aa)
	D5GI46_TUBMM	PCI domain-containing protein. (417 aa)
	D5GJ17_TUBMM	Proteasome subunit alpha type. (256 aa)
	D5GK50_TUBMM	MPN domain-containing protein. (346 aa)
	D5GM39_TUBMM	PCI domain-containing protein. (579 aa)
	D5GM49_TUBMM	PCI domain-containing protein. (399 aa)
	D5GMY8_TUBMM	AAA domain-containing protein; Belongs to the AAA ATPase family. (455 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G4M1_TUBMM	D5G8F9_TUBMM	D5G4M1	D5G8F9	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.999
D5G4M1_TUBMM	D5G956_TUBMM	D5G4M1	D5G956	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
D5G4M1_TUBMM	D5GB69_TUBMM	D5G4M1	D5GB69	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
D5G4M1_TUBMM	D5GBE1_TUBMM	D5G4M1	D5GBE1	AAA domain-containing protein; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.999
D5G4M1_TUBMM	D5GGP4_TUBMM	D5G4M1	D5GGP4	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
D5G4M1_TUBMM	D5GI46_TUBMM	D5G4M1	D5GI46	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
D5G4M1_TUBMM	D5GJ17_TUBMM	D5G4M1	D5GJ17	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.999
D5G4M1_TUBMM	D5GK50_TUBMM	D5G4M1	D5GK50	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.999
D5G4M1_TUBMM	D5GM39_TUBMM	D5G4M1	D5GM39	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
D5G4M1_TUBMM	D5GM49_TUBMM	D5G4M1	D5GM49	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
D5G4M1_TUBMM	D5GMY8_TUBMM	D5G4M1	D5GMY8	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
D5G8F9_TUBMM	D5G4M1_TUBMM	D5G8F9	D5G4M1	MPN domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
D5G8F9_TUBMM	D5G956_TUBMM	D5G8F9	D5G956	MPN domain-containing protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
D5G8F9_TUBMM	D5GB69_TUBMM	D5G8F9	D5GB69	MPN domain-containing protein.	PCI domain-containing protein.	0.999
D5G8F9_TUBMM	D5GBE1_TUBMM	D5G8F9	D5GBE1	MPN domain-containing protein.	VWFA domain-containing protein.	0.999
D5G8F9_TUBMM	D5GGP4_TUBMM	D5G8F9	D5GGP4	MPN domain-containing protein.	PCI domain-containing protein.	0.999
D5G8F9_TUBMM	D5GI46_TUBMM	D5G8F9	D5GI46	MPN domain-containing protein.	PCI domain-containing protein.	0.999
D5G8F9_TUBMM	D5GJ17_TUBMM	D5G8F9	D5GJ17	MPN domain-containing protein.	Proteasome subunit alpha type.	0.985
D5G8F9_TUBMM	D5GK50_TUBMM	D5G8F9	D5GK50	MPN domain-containing protein.	MPN domain-containing protein.	0.999
D5G8F9_TUBMM	D5GM39_TUBMM	D5G8F9	D5GM39	MPN domain-containing protein.	PCI domain-containing protein.	0.999