STRINGSTRING
D5G445_TUBMM D5G445_TUBMM D5G4U3_TUBMM D5G4U3_TUBMM D5G5X0_TUBMM D5G5X0_TUBMM D5G5X6_TUBMM D5G5X6_TUBMM D5G674_TUBMM D5G674_TUBMM D5G675_TUBMM D5G675_TUBMM D5G763_TUBMM D5G763_TUBMM D5G7P9_TUBMM D5G7P9_TUBMM D5G7Q2_TUBMM D5G7Q2_TUBMM D5G7T0_TUBMM D5G7T0_TUBMM D5G7W3_TUBMM D5G7W3_TUBMM D5G825_TUBMM D5G825_TUBMM D5G8A7_TUBMM D5G8A7_TUBMM D5G8G1_TUBMM D5G8G1_TUBMM D5G8Z9_TUBMM D5G8Z9_TUBMM D5G915_TUBMM D5G915_TUBMM D5G963_TUBMM D5G963_TUBMM D5G9K1_TUBMM D5G9K1_TUBMM D5GB52_TUBMM D5GB52_TUBMM D5GB65_TUBMM D5GB65_TUBMM D5GB88_TUBMM D5GB88_TUBMM D5GCC5_TUBMM D5GCC5_TUBMM D5GCT6_TUBMM D5GCT6_TUBMM D5GD20_TUBMM D5GD20_TUBMM D5GD47_TUBMM D5GD47_TUBMM D5GDE9_TUBMM D5GDE9_TUBMM D5GDH6_TUBMM D5GDH6_TUBMM D5GDI7_TUBMM D5GDI7_TUBMM D5GDP2_TUBMM D5GDP2_TUBMM D5GEA1_TUBMM D5GEA1_TUBMM D5GEJ8_TUBMM D5GEJ8_TUBMM D5GEV5_TUBMM D5GEV5_TUBMM D5GFD6_TUBMM D5GFD6_TUBMM D5GFE4_TUBMM D5GFE4_TUBMM D5GFS9_TUBMM D5GFS9_TUBMM D5GGR7_TUBMM D5GGR7_TUBMM D5GH70_TUBMM D5GH70_TUBMM D5GHW4_TUBMM D5GHW4_TUBMM D5GIM4_TUBMM D5GIM4_TUBMM D5GIN2_TUBMM D5GIN2_TUBMM D5GIQ1_TUBMM D5GIQ1_TUBMM D5GIS2_TUBMM D5GIS2_TUBMM D5GJ86_TUBMM D5GJ86_TUBMM D5GJ94_TUBMM D5GJ94_TUBMM D5GJ97_TUBMM D5GJ97_TUBMM D5GJ99_TUBMM D5GJ99_TUBMM D5GJI2_TUBMM D5GJI2_TUBMM D5GJJ3_TUBMM D5GJJ3_TUBMM D5GJX7_TUBMM D5GJX7_TUBMM D5GK28_TUBMM D5GK28_TUBMM D5GK82_TUBMM D5GK82_TUBMM D5GKA9_TUBMM D5GKA9_TUBMM D5GKH8_TUBMM D5GKH8_TUBMM D5GKM4_TUBMM D5GKM4_TUBMM D5GKT6_TUBMM D5GKT6_TUBMM D5GL64_TUBMM D5GL64_TUBMM D5GLV0_TUBMM D5GLV0_TUBMM D5GLV5_TUBMM D5GLV5_TUBMM D5GM43_TUBMM D5GM43_TUBMM D5GM47_TUBMM D5GM47_TUBMM D5GM48_TUBMM D5GM48_TUBMM D5GM63_TUBMM D5GM63_TUBMM D5GMC8_TUBMM D5GMC8_TUBMM D5GME3_TUBMM D5GME3_TUBMM D5GMM6_TUBMM D5GMM6_TUBMM D5GN25_TUBMM D5GN25_TUBMM D5GN86_TUBMM D5GN86_TUBMM D5GNB6_TUBMM D5GNB6_TUBMM D5GNE3_TUBMM D5GNE3_TUBMM D5GNK2_TUBMM D5GNK2_TUBMM D5GNK6_TUBMM D5GNK6_TUBMM D5GNN0_TUBMM D5GNN0_TUBMM D5GNN4_TUBMM D5GNN4_TUBMM D5GNP0_TUBMM D5GNP0_TUBMM D5GP56_TUBMM D5GP56_TUBMM D5GPG2_TUBMM D5GPG2_TUBMM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D5G445_TUBMMUncharacterized protein. (178 aa)
D5G4U3_TUBMMBTB domain-containing protein. (324 aa)
D5G5X0_TUBMMTAF domain-containing protein. (472 aa)
D5G5X6_TUBMMBTP domain-containing protein. (143 aa)
D5G674_TUBMMUncharacterized protein; Belongs to the RNA polymerase beta chain family. (620 aa)
D5G675_TUBMMUncharacterized protein. (436 aa)
D5G763_TUBMMRPOLD domain-containing protein. (340 aa)
D5G7P9_TUBMMUncharacterized protein. (1019 aa)
D5G7Q2_TUBMMUncharacterized protein. (174 aa)
D5G7T0_TUBMMUncharacterized protein. (826 aa)
D5G7W3_TUBMMHTH TFE/IIEalpha-type domain-containing protein. (454 aa)
D5G825_TUBMMUncharacterized protein. (436 aa)
D5G8A7_TUBMMRNA_pol_L_2 domain-containing protein. (119 aa)
D5G8G1_TUBMMTranscription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (229 aa)
D5G8Z9_TUBMMUncharacterized protein. (269 aa)
D5G915_TUBMMUncharacterized protein. (120 aa)
D5G963_TUBMMUncharacterized protein. (253 aa)
D5G9K1_TUBMMUncharacterized protein. (156 aa)
D5GB52_TUBMMTAFII55_N domain-containing protein. (457 aa)
D5GB65_TUBMMDUF3591 domain-containing protein. (1084 aa)
D5GB88_TUBMMC3H1-type domain-containing protein. (536 aa)
D5GCC5_TUBMMUncharacterized protein. (358 aa)
D5GCT6_TUBMMTranscription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (122 aa)
D5GD20_TUBMMTranscription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1419 aa)
D5GD47_TUBMMUncharacterized protein. (373 aa)
D5GDE9_TUBMMTranscription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (228 aa)
D5GDH6_TUBMMUncharacterized protein. (337 aa)
D5GDI7_TUBMMUncharacterized protein. (514 aa)
D5GDP2_TUBMMHelicase ATP-binding domain-containing protein. (807 aa)
D5GEA1_TUBMMTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (114 aa)
D5GEJ8_TUBMMUncharacterized protein. (1181 aa)
D5GEV5_TUBMMTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (115 aa)
D5GFD6_TUBMMBTB domain-containing protein. (220 aa)
D5GFE4_TUBMMZZ-type domain-containing protein. (381 aa)
D5GFS9_TUBMMUncharacterized protein. (232 aa)
D5GGR7_TUBMMRNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (896 aa)
D5GH70_TUBMMTFIIB-type domain-containing protein. (346 aa)
D5GHW4_TUBMMNAD_binding_6 domain-containing protein. (807 aa)
D5GIM4_TUBMMTyosinase_C domain-containing protein. (300 aa)
D5GIN2_TUBMMRING-type domain-containing protein. (373 aa)
D5GIQ1_TUBMMTranscription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (203 aa)
D5GIS2_TUBMMUncharacterized protein. (83 aa)
D5GJ86_TUBMMUncharacterized protein. (1269 aa)
D5GJ94_TUBMMUncharacterized protein. (357 aa)
D5GJ97_TUBMMUncharacterized protein. (105 aa)
D5GJ99_TUBMMUncharacterized protein. (110 aa)
D5GJI2_TUBMMRTR1-type domain-containing protein. (314 aa)
D5GJJ3_TUBMMDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
D5GJX7_TUBMMUncharacterized protein. (471 aa)
D5GK28_TUBMMTAF4 domain-containing protein. (443 aa)
D5GK82_TUBMMGeneral transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (469 aa)
D5GKA9_TUBMMTFIIS N-terminal domain-containing protein. (395 aa)
D5GKH8_TUBMMUncharacterized protein. (422 aa)
D5GKM4_TUBMMRNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (460 aa)
D5GKT6_TUBMMUncharacterized protein. (1025 aa)
D5GL64_TUBMMUncharacterized protein. (390 aa)
D5GLV0_TUBMMUncharacterized protein. (241 aa)
D5GLV5_TUBMMUncharacterized protein. (690 aa)
D5GM43_TUBMMUncharacterized protein. (616 aa)
D5GM47_TUBMMUncharacterized protein. (370 aa)
D5GM48_TUBMMTranscription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1054 aa)
D5GM63_TUBMMS1 motif domain-containing protein. (180 aa)
D5GMC8_TUBMMUncharacterized protein. (73 aa)
D5GME3_TUBMMHelicase ATP-binding domain-containing protein. (748 aa)
D5GMM6_TUBMMCDC73_C domain-containing protein. (415 aa)
D5GN25_TUBMMTFIID_20kDa domain-containing protein. (725 aa)
D5GN86_TUBMMFACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (570 aa)
D5GNB6_TUBMMProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (378 aa)
D5GNE3_TUBMMTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (762 aa)
D5GNK2_TUBMMUncharacterized protein. (76 aa)
D5GNK6_TUBMMUncharacterized protein. (220 aa)
D5GNN0_TUBMMRPOL4c domain-containing protein. (146 aa)
D5GNN4_TUBMMUncharacterized protein. (524 aa)
D5GNP0_TUBMMTranscription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (285 aa)
D5GP56_TUBMMTAFII28 domain-containing protein. (258 aa)
D5GPG2_TUBMMPlus3 domain-containing protein. (567 aa)
Your Current Organism:
Tuber melanosporum
NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28
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