(23 nodes) RNA Polymerase III Transcription, and RNA polymerase I complex network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G821_TUBMM	BTB domain-containing protein. (862 aa)
	D5G879_TUBMM	Uncharacterized protein. (427 aa)
	D5G8D7_TUBMM	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (544 aa)
	D5G8D8_TUBMM	Uncharacterized protein. (1056 aa)
	D5G8S6_TUBMM	Uncharacterized protein. (631 aa)
	D5G8Y9_TUBMM	Uncharacterized protein. (581 aa)
	D5G9H5_TUBMM	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (111 aa)
	D5GAS5_TUBMM	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (643 aa)
	D5GAW4_TUBMM	SANT domain-containing protein. (664 aa)
	D5GDE1_TUBMM	RNA_pol_L_2 domain-containing protein. (105 aa)
	D5GDS7_TUBMM	Uncharacterized protein. (442 aa)
	D5GDS8_TUBMM	RNA_pol_Rpb1_5 domain-containing protein. (449 aa)
	D5GEE6_TUBMM	Uncharacterized protein. (434 aa)
	D5GJJ8_TUBMM	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (660 aa)
	D5GJJ9_TUBMM	Uncharacterized protein. (422 aa)
	D5GJN7_TUBMM	Uncharacterized protein. (434 aa)
	D5GJN8_TUBMM	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (660 aa)
	D5GKC0_TUBMM	RPOLD domain-containing protein. (377 aa)
	D5GKL8_TUBMM	Uncharacterized protein. (194 aa)
	D5GKX1_TUBMM	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (303 aa)
	D5GKX5_TUBMM	Uncharacterized protein. (269 aa)
	D5GNC1_TUBMM	Uncharacterized protein. (618 aa)
	D5GNM5_TUBMM	TFIIB-type domain-containing protein. (553 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G821_TUBMM	D5G879_TUBMM	D5G821	D5G879	BTB domain-containing protein.	Uncharacterized protein.	0.744
D5G821_TUBMM	D5G8D7_TUBMM	D5G821	D5G8D7	BTB domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.689
D5G821_TUBMM	D5G8D8_TUBMM	D5G821	D5G8D8	BTB domain-containing protein.	Uncharacterized protein.	0.689
D5G821_TUBMM	D5G8S6_TUBMM	D5G821	D5G8S6	BTB domain-containing protein.	Uncharacterized protein.	0.827
D5G821_TUBMM	D5G8Y9_TUBMM	D5G821	D5G8Y9	BTB domain-containing protein.	Uncharacterized protein.	0.803
D5G821_TUBMM	D5G9H5_TUBMM	D5G821	D5G9H5	BTB domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.783
D5G821_TUBMM	D5GAS5_TUBMM	D5G821	D5GAS5	BTB domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.816
D5G821_TUBMM	D5GAW4_TUBMM	D5G821	D5GAW4	BTB domain-containing protein.	SANT domain-containing protein.	0.951
D5G821_TUBMM	D5GDE1_TUBMM	D5G821	D5GDE1	BTB domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.683
D5G821_TUBMM	D5GDS7_TUBMM	D5G821	D5GDS7	BTB domain-containing protein.	Uncharacterized protein.	0.716
D5G821_TUBMM	D5GDS8_TUBMM	D5G821	D5GDS8	BTB domain-containing protein.	RNA_pol_Rpb1_5 domain-containing protein.	0.716
D5G821_TUBMM	D5GEE6_TUBMM	D5G821	D5GEE6	BTB domain-containing protein.	Uncharacterized protein.	0.642
D5G821_TUBMM	D5GJJ8_TUBMM	D5G821	D5GJJ8	BTB domain-containing protein.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.714
D5G821_TUBMM	D5GJJ9_TUBMM	D5G821	D5GJJ9	BTB domain-containing protein.	Uncharacterized protein.	0.714
D5G821_TUBMM	D5GJN7_TUBMM	D5G821	D5GJN7	BTB domain-containing protein.	Uncharacterized protein.	0.704
D5G821_TUBMM	D5GJN8_TUBMM	D5G821	D5GJN8	BTB domain-containing protein.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.704
D5G821_TUBMM	D5GKC0_TUBMM	D5G821	D5GKC0	BTB domain-containing protein.	RPOLD domain-containing protein.	0.841
D5G821_TUBMM	D5GKL8_TUBMM	D5G821	D5GKL8	BTB domain-containing protein.	Uncharacterized protein.	0.786
D5G821_TUBMM	D5GKX1_TUBMM	D5G821	D5GKX1	BTB domain-containing protein.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.841
D5G821_TUBMM	D5GKX5_TUBMM	D5G821	D5GKX5	BTB domain-containing protein.	Uncharacterized protein.	0.644