(18 nodes) Protein deubiquitination, and Carbon catabolite repression network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G5I2_TUBMM	Zn(2)-C6 fungal-type domain-containing protein. (906 aa)
	D5G6U8_TUBMM	Uncharacterized protein. (477 aa)
	D5G7I7_TUBMM	Uncharacterized protein. (422 aa)
	D5G8H6_TUBMM	OTU domain-containing protein. (301 aa)
	D5G9K3_TUBMM	Uncharacterized protein; Belongs to the peptidase C19 family. (1135 aa)
	D5GBQ8_TUBMM	Ubiquitin carboxyl-terminal hydrolase. (789 aa)
	D5GCG8_TUBMM	Uncharacterized protein. (594 aa)
	D5GCV6_TUBMM	WD_REPEATS_REGION domain-containing protein. (1079 aa)
	D5GD37_TUBMM	USP domain-containing protein. (1091 aa)
	D5GFL3_TUBMM	WD_REPEATS_REGION domain-containing protein. (567 aa)
	D5GFL5_TUBMM	Arrestin_C domain-containing protein. (595 aa)
	D5GFS7_TUBMM	Uncharacterized protein. (709 aa)
	D5GIE5_TUBMM	USP domain-containing protein; Belongs to the peptidase C19 family. (654 aa)
	D5GK72_TUBMM	Uncharacterized protein. (391 aa)
	D5GK84_TUBMM	Ubiquitin carboxyl-terminal hydrolase. (709 aa)
	D5GKF1_TUBMM	Uncharacterized protein; Belongs to the peptidase C19 family. (1176 aa)
	D5GMH4_TUBMM	Uncharacterized protein. (317 aa)
	D5GPZ0_TUBMM	Uncharacterized protein. (559 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G5I2_TUBMM	D5G6U8_TUBMM	D5G5I2	D5G6U8	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.650
D5G5I2_TUBMM	D5G7I7_TUBMM	D5G5I2	D5G7I7	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.665
D5G5I2_TUBMM	D5GFL3_TUBMM	D5G5I2	D5GFL3	Zn(2)-C6 fungal-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.537
D5G6U8_TUBMM	D5G5I2_TUBMM	D5G6U8	D5G5I2	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.650
D5G6U8_TUBMM	D5G7I7_TUBMM	D5G6U8	D5G7I7	Uncharacterized protein.	Uncharacterized protein.	0.482
D5G6U8_TUBMM	D5GFL3_TUBMM	D5G6U8	D5GFL3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.516
D5G7I7_TUBMM	D5G5I2_TUBMM	D5G7I7	D5G5I2	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.665
D5G7I7_TUBMM	D5G6U8_TUBMM	D5G7I7	D5G6U8	Uncharacterized protein.	Uncharacterized protein.	0.482
D5G7I7_TUBMM	D5GFL3_TUBMM	D5G7I7	D5GFL3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.665
D5G7I7_TUBMM	D5GFL5_TUBMM	D5G7I7	D5GFL5	Uncharacterized protein.	Arrestin_C domain-containing protein.	0.628
D5G7I7_TUBMM	D5GIE5_TUBMM	D5G7I7	D5GIE5	Uncharacterized protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.633
D5G8H6_TUBMM	D5G9K3_TUBMM	D5G8H6	D5G9K3	OTU domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.571
D5G8H6_TUBMM	D5GBQ8_TUBMM	D5G8H6	D5GBQ8	OTU domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.617
D5G8H6_TUBMM	D5GD37_TUBMM	D5G8H6	D5GD37	OTU domain-containing protein.	USP domain-containing protein.	0.589
D5G8H6_TUBMM	D5GIE5_TUBMM	D5G8H6	D5GIE5	OTU domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.563
D5G8H6_TUBMM	D5GK84_TUBMM	D5G8H6	D5GK84	OTU domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.507
D5G8H6_TUBMM	D5GKF1_TUBMM	D5G8H6	D5GKF1	OTU domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.487
D5G9K3_TUBMM	D5G8H6_TUBMM	D5G9K3	D5G8H6	Uncharacterized protein; Belongs to the peptidase C19 family.	OTU domain-containing protein.	0.571
D5G9K3_TUBMM	D5GBQ8_TUBMM	D5G9K3	D5GBQ8	Uncharacterized protein; Belongs to the peptidase C19 family.	Ubiquitin carboxyl-terminal hydrolase.	0.762
D5G9K3_TUBMM	D5GCG8_TUBMM	D5G9K3	D5GCG8	Uncharacterized protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.447