33 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G4E2_TUBMM	Uncharacterized protein. (624 aa)
	D5G4P5_TUBMM	Uncharacterized protein. (598 aa)
	D5G5P6_TUBMM	Uncharacterized protein. (361 aa)
	D5G5Y4_TUBMM	Uncharacterized protein. (406 aa)
	D5G7R5_TUBMM	GATA-type domain-containing protein. (930 aa)
	D5G9K7_TUBMM	BZIP domain-containing protein. (513 aa)
	D5G9S8_TUBMM	Uncharacterized protein. (314 aa)
	D5G9U6_TUBMM	TEA domain-containing protein. (593 aa)
	D5GB51_TUBMM	Uncharacterized protein. (660 aa)
	D5GBP4_TUBMM	HTH APSES-type domain-containing protein. (862 aa)
	D5GDD2_TUBMM	Fork-head domain-containing protein. (694 aa)
	D5GEE9_TUBMM	Uncharacterized protein. (666 aa)
	D5GEG1_TUBMM	CBFD_NFYB_HMF domain-containing protein. (288 aa)
	D5GFP3_TUBMM	Uncharacterized protein. (109 aa)
	D5GFS0_TUBMM	Uncharacterized protein. (724 aa)
	D5GGG5_TUBMM	Velvet domain-containing protein. (696 aa)
	D5GGL4_TUBMM	Uncharacterized protein. (874 aa)
	D5GIP1_TUBMM	BHLH domain-containing protein. (353 aa)
	D5GIV0_TUBMM	Uncharacterized protein. (559 aa)
	D5GJ28_TUBMM	CBFD_NFYB_HMF domain-containing protein. (199 aa)
	D5GK02_TUBMM	NmrA domain-containing protein. (361 aa)
	D5GKH4_TUBMM	Velvet domain-containing protein. (366 aa)
	D5GKT0_TUBMM	BHLH domain-containing protein. (246 aa)
	D5GL42_TUBMM	Uncharacterized protein. (320 aa)
	D5GLM1_TUBMM	Velvet domain-containing protein. (439 aa)
	D5GLR4_TUBMM	Uncharacterized protein. (312 aa)
	D5GMI1_TUBMM	CBFD_NFYB_HMF domain-containing protein. (170 aa)
	D5GN77_TUBMM	Homeobox domain-containing protein. (653 aa)
	D5GN94_TUBMM	Uncharacterized protein. (414 aa)
	D5GNB1_TUBMM	Uncharacterized protein. (748 aa)
	D5GNL5_TUBMM	Uncharacterized protein. (658 aa)
	D5GP06_TUBMM	Uncharacterized protein. (351 aa)
	D5GP75_TUBMM	Uncharacterized protein. (251 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G4E2_TUBMM	D5G7R5_TUBMM	D5G4E2	D5G7R5	Uncharacterized protein.	GATA-type domain-containing protein.	0.506
D5G4E2_TUBMM	D5GB51_TUBMM	D5G4E2	D5GB51	Uncharacterized protein.	Uncharacterized protein.	0.447
D5G4E2_TUBMM	D5GDD2_TUBMM	D5G4E2	D5GDD2	Uncharacterized protein.	Fork-head domain-containing protein.	0.705
D5G4E2_TUBMM	D5GIV0_TUBMM	D5G4E2	D5GIV0	Uncharacterized protein.	Uncharacterized protein.	0.482
D5G4E2_TUBMM	D5GNB1_TUBMM	D5G4E2	D5GNB1	Uncharacterized protein.	Uncharacterized protein.	0.487
D5G4E2_TUBMM	D5GNL5_TUBMM	D5G4E2	D5GNL5	Uncharacterized protein.	Uncharacterized protein.	0.545
D5G4P5_TUBMM	D5GB51_TUBMM	D5G4P5	D5GB51	Uncharacterized protein.	Uncharacterized protein.	0.422
D5G4P5_TUBMM	D5GNB1_TUBMM	D5G4P5	D5GNB1	Uncharacterized protein.	Uncharacterized protein.	0.819
D5G5Y4_TUBMM	D5G9K7_TUBMM	D5G5Y4	D5G9K7	Uncharacterized protein.	BZIP domain-containing protein.	0.826
D5G5Y4_TUBMM	D5G9U6_TUBMM	D5G5Y4	D5G9U6	Uncharacterized protein.	TEA domain-containing protein.	0.449
D5G5Y4_TUBMM	D5GEG1_TUBMM	D5G5Y4	D5GEG1	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.998
D5G5Y4_TUBMM	D5GJ28_TUBMM	D5G5Y4	D5GJ28	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.998
D5G5Y4_TUBMM	D5GMI1_TUBMM	D5G5Y4	D5GMI1	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.935
D5G5Y4_TUBMM	D5GNL5_TUBMM	D5G5Y4	D5GNL5	Uncharacterized protein.	Uncharacterized protein.	0.576
D5G7R5_TUBMM	D5G4E2_TUBMM	D5G7R5	D5G4E2	GATA-type domain-containing protein.	Uncharacterized protein.	0.506
D5G7R5_TUBMM	D5GDD2_TUBMM	D5G7R5	D5GDD2	GATA-type domain-containing protein.	Fork-head domain-containing protein.	0.436
D5G7R5_TUBMM	D5GEG1_TUBMM	D5G7R5	D5GEG1	GATA-type domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.400
D5G7R5_TUBMM	D5GJ28_TUBMM	D5G7R5	D5GJ28	GATA-type domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.452
D5G7R5_TUBMM	D5GK02_TUBMM	D5G7R5	D5GK02	GATA-type domain-containing protein.	NmrA domain-containing protein.	0.902
D5G7R5_TUBMM	D5GNL5_TUBMM	D5G7R5	D5GNL5	GATA-type domain-containing protein.	Uncharacterized protein.	0.669