23 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G441_TUBMM	Uncharacterized protein. (241 aa)
	D5G650_TUBMM	Uncharacterized protein. (124 aa)
	D5G669_TUBMM	Uncharacterized protein. (453 aa)
	D5G6E8_TUBMM	Homeobox domain-containing protein. (249 aa)
	D5G6G7_TUBMM	Uncharacterized protein. (360 aa)
	D5G9F8_TUBMM	BHLH domain-containing protein. (631 aa)
	D5GA02_TUBMM	Homeobox domain-containing protein. (661 aa)
	D5GB23_TUBMM	Uncharacterized protein. (239 aa)
	D5GB24_TUBMM	Uncharacterized protein. (203 aa)
	D5GCT3_TUBMM	BHLH domain-containing protein. (350 aa)
	D5GCY1_TUBMM	Uncharacterized protein. (413 aa)
	D5GD56_TUBMM	Uncharacterized protein. (327 aa)
	D5GDK9_TUBMM	Uncharacterized protein. (118 aa)
	D5GDM1_TUBMM	HMG box domain-containing protein. (297 aa)
	D5GEF3_TUBMM	Myb-like domain-containing protein. (236 aa)
	D5GEP6_TUBMM	Homeobox domain-containing protein. (97 aa)
	D5GFE3_TUBMM	Uncharacterized protein. (157 aa)
	D5GGH6_TUBMM	ANK_REP_REGION domain-containing protein. (1081 aa)
	D5GH52_TUBMM	Uncharacterized protein. (421 aa)
	D5GJY4_TUBMM	BHLH domain-containing protein. (351 aa)
	D5GNS3_TUBMM	Uncharacterized protein. (496 aa)
	D5GPE0_TUBMM	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...] (399 aa)
	D5GQ22_TUBMM	Uncharacterized protein. (300 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G650_TUBMM	D5GPE0_TUBMM	D5G650	D5GPE0	Uncharacterized protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.774
D5G669_TUBMM	D5GPE0_TUBMM	D5G669	D5GPE0	Uncharacterized protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.774
D5G6E8_TUBMM	D5GEP6_TUBMM	D5G6E8	D5GEP6	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.420
D5G6G7_TUBMM	D5GDM1_TUBMM	D5G6G7	D5GDM1	Uncharacterized protein.	HMG box domain-containing protein.	0.425
D5G9F8_TUBMM	D5GPE0_TUBMM	D5G9F8	D5GPE0	BHLH domain-containing protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.456
D5GA02_TUBMM	D5GEP6_TUBMM	D5GA02	D5GEP6	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.420
D5GB23_TUBMM	D5GPE0_TUBMM	D5GB23	D5GPE0	Uncharacterized protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.774
D5GB24_TUBMM	D5GPE0_TUBMM	D5GB24	D5GPE0	Uncharacterized protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.774
D5GCT3_TUBMM	D5GPE0_TUBMM	D5GCT3	D5GPE0	BHLH domain-containing protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.456
D5GCY1_TUBMM	D5GH52_TUBMM	D5GCY1	D5GH52	Uncharacterized protein.	Uncharacterized protein.	0.478
D5GD56_TUBMM	D5GEP6_TUBMM	D5GD56	D5GEP6	Uncharacterized protein.	Homeobox domain-containing protein.	0.612
D5GDM1_TUBMM	D5G6G7_TUBMM	D5GDM1	D5G6G7	HMG box domain-containing protein.	Uncharacterized protein.	0.425
D5GEP6_TUBMM	D5G6E8_TUBMM	D5GEP6	D5G6E8	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.420
D5GEP6_TUBMM	D5GA02_TUBMM	D5GEP6	D5GA02	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.420
D5GEP6_TUBMM	D5GD56_TUBMM	D5GEP6	D5GD56	Homeobox domain-containing protein.	Uncharacterized protein.	0.612
D5GEP6_TUBMM	D5GPE0_TUBMM	D5GEP6	D5GPE0	Homeobox domain-containing protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.431
D5GH52_TUBMM	D5GCY1_TUBMM	D5GH52	D5GCY1	Uncharacterized protein.	Uncharacterized protein.	0.478
D5GNS3_TUBMM	D5GPE0_TUBMM	D5GNS3	D5GPE0	Uncharacterized protein.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.774
D5GPE0_TUBMM	D5G650_TUBMM	D5GPE0	D5G650	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	Uncharacterized protein.	0.774
D5GPE0_TUBMM	D5G669_TUBMM	D5GPE0	D5G669	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	Uncharacterized protein.	0.774