6 items (Tuber melanosporum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G6E8_TUBMM	Homeobox domain-containing protein. (249 aa)
	D5GA02_TUBMM	Homeobox domain-containing protein. (661 aa)
	D5GD56_TUBMM	Uncharacterized protein. (327 aa)
	D5GDK9_TUBMM	Uncharacterized protein. (118 aa)
	D5GEP6_TUBMM	Homeobox domain-containing protein. (97 aa)
	D5GFE3_TUBMM	Uncharacterized protein. (157 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G6E8_TUBMM	D5GEP6_TUBMM	D5G6E8	D5GEP6	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.420
D5GA02_TUBMM	D5GEP6_TUBMM	D5GA02	D5GEP6	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.420
D5GD56_TUBMM	D5GEP6_TUBMM	D5GD56	D5GEP6	Uncharacterized protein.	Homeobox domain-containing protein.	0.612
D5GEP6_TUBMM	D5G6E8_TUBMM	D5GEP6	D5G6E8	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.420
D5GEP6_TUBMM	D5GA02_TUBMM	D5GEP6	D5GA02	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.420
D5GEP6_TUBMM	D5GD56_TUBMM	D5GEP6	D5GD56	Homeobox domain-containing protein.	Uncharacterized protein.	0.612