(24 nodes) Cytosolic ribosome network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G7B5_TUBMM	Uncharacterized protein. (321 aa)
	D5G7S8_TUBMM	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	D5G8F3_TUBMM	Uncharacterized protein. (114 aa)
	D5G989_TUBMM	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (203 aa)
	D5G992_TUBMM	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (62 aa)
	D5G9C7_TUBMM	Uncharacterized protein. (249 aa)
	D5G9E5_TUBMM	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (122 aa)
	D5G9V5_TUBMM	Uncharacterized protein. (122 aa)
	D5G9W2_TUBMM	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (148 aa)
	D5GBR0_TUBMM	Uncharacterized protein. (189 aa)
	D5GBY7_TUBMM	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (195 aa)
	D5GED2_TUBMM	KOW domain-containing protein. (136 aa)
	D5GH84_TUBMM	Uncharacterized protein. (68 aa)
	D5GHQ3_TUBMM	40S ribosomal protein S27. (113 aa)
	D5GHR0_TUBMM	Ribosomal_L7Ae domain-containing protein. (198 aa)
	D5GHS7_TUBMM	Uncharacterized protein. (152 aa)
	D5GIV4_TUBMM	Uncharacterized protein. (108 aa)
	D5GJB1_TUBMM	Uncharacterized protein. (60 aa)
	D5GK81_TUBMM	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (92 aa)
	D5GKB6_TUBMM	Uncharacterized protein. (147 aa)
	D5GL13_TUBMM	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
	D5GL18_TUBMM	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (201 aa)
	D5GMA1_TUBMM	Uncharacterized protein. (137 aa)
	D5GNZ9_TUBMM	Ribosomal_L23eN domain-containing protein. (155 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G7B5_TUBMM	D5G7S8_TUBMM	D5G7B5	D5G7S8	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
D5G7B5_TUBMM	D5G8F3_TUBMM	D5G7B5	D5G8F3	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G7B5_TUBMM	D5G989_TUBMM	D5G7B5	D5G989	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
D5G7B5_TUBMM	D5G992_TUBMM	D5G7B5	D5G992	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
D5G7B5_TUBMM	D5G9C7_TUBMM	D5G7B5	D5G9C7	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G7B5_TUBMM	D5G9E5_TUBMM	D5G7B5	D5G9E5	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
D5G7B5_TUBMM	D5G9V5_TUBMM	D5G7B5	D5G9V5	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G7B5_TUBMM	D5G9W2_TUBMM	D5G7B5	D5G9W2	Uncharacterized protein.	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
D5G7B5_TUBMM	D5GBR0_TUBMM	D5G7B5	D5GBR0	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G7B5_TUBMM	D5GBY7_TUBMM	D5G7B5	D5GBY7	Uncharacterized protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
D5G7B5_TUBMM	D5GED2_TUBMM	D5G7B5	D5GED2	Uncharacterized protein.	KOW domain-containing protein.	0.999
D5G7B5_TUBMM	D5GH84_TUBMM	D5G7B5	D5GH84	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G7B5_TUBMM	D5GHQ3_TUBMM	D5G7B5	D5GHQ3	Uncharacterized protein.	40S ribosomal protein S27.	0.999
D5G7B5_TUBMM	D5GHR0_TUBMM	D5G7B5	D5GHR0	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.999
D5G7B5_TUBMM	D5GHS7_TUBMM	D5G7B5	D5GHS7	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G7B5_TUBMM	D5GIV4_TUBMM	D5G7B5	D5GIV4	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G7B5_TUBMM	D5GJB1_TUBMM	D5G7B5	D5GJB1	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G7B5_TUBMM	D5GK81_TUBMM	D5G7B5	D5GK81	Uncharacterized protein.	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	0.999
D5G7B5_TUBMM	D5GKB6_TUBMM	D5G7B5	D5GKB6	Uncharacterized protein.	Uncharacterized protein.	0.999
D5G7B5_TUBMM	D5GL13_TUBMM	D5G7B5	D5GL13	Uncharacterized protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999