(26 nodes) Ubiquitin-dependent ERAD pathway, and KEAP1-NFE2L2 pathway network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G408_TUBMM	Uncharacterized protein. (325 aa)
	D5G424_TUBMM	U-box domain-containing protein. (1072 aa)
	D5G4P0_TUBMM	Uncharacterized protein. (751 aa)
	D5G4R8_TUBMM	bVLRF1 domain-containing protein. (612 aa)
	D5G597_TUBMM	UBX domain-containing protein. (510 aa)
	D5G5L9_TUBMM	UBX domain-containing protein. (532 aa)
	D5G5U0_TUBMM	PRKCSH domain-containing protein. (375 aa)
	D5G663_TUBMM	AAA domain-containing protein. (986 aa)
	D5G6G1_TUBMM	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (306 aa)
	D5G7W0_TUBMM	Uncharacterized protein. (261 aa)
	D5G835_TUBMM	Uncharacterized protein. (753 aa)
	D5G9U0_TUBMM	Uncharacterized protein. (878 aa)
	D5GC80_TUBMM	AAA domain-containing protein. (831 aa)
	D5GDB4_TUBMM	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (227 aa)
	D5GDU7_TUBMM	OTU domain-containing protein. (326 aa)
	D5GE90_TUBMM	RING-type domain-containing protein. (968 aa)
	D5GEJ1_TUBMM	Uncharacterized protein. (385 aa)
	D5GEX5_TUBMM	AAA domain-containing protein. (1108 aa)
	D5GG29_TUBMM	Uncharacterized protein; Belongs to the AAA ATPase family. (651 aa)
	D5GJ23_TUBMM	MPN domain-containing protein. (675 aa)
	D5GK37_TUBMM	Uncharacterized protein. (367 aa)
	D5GLE5_TUBMM	Uncharacterized protein; Belongs to the AAA ATPase family. (818 aa)
	D5GLX3_TUBMM	RING-type domain-containing protein. (540 aa)
	D5GNF4_TUBMM	TGc domain-containing protein. (475 aa)
	D5GP55_TUBMM	Uncharacterized protein. (391 aa)
	D5GPN6_TUBMM	UBX domain-containing protein. (501 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G408_TUBMM	D5G4P0_TUBMM	D5G408	D5G4P0	Uncharacterized protein.	Uncharacterized protein.	0.586
D5G408_TUBMM	D5G597_TUBMM	D5G408	D5G597	Uncharacterized protein.	UBX domain-containing protein.	0.651
D5G408_TUBMM	D5G5L9_TUBMM	D5G408	D5G5L9	Uncharacterized protein.	UBX domain-containing protein.	0.836
D5G408_TUBMM	D5G663_TUBMM	D5G408	D5G663	Uncharacterized protein.	AAA domain-containing protein.	0.558
D5G408_TUBMM	D5G6G1_TUBMM	D5G408	D5G6G1	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.939
D5G408_TUBMM	D5GC80_TUBMM	D5G408	D5GC80	Uncharacterized protein.	AAA domain-containing protein.	0.558
D5G408_TUBMM	D5GDB4_TUBMM	D5G408	D5GDB4	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.685
D5G408_TUBMM	D5GE90_TUBMM	D5G408	D5GE90	Uncharacterized protein.	RING-type domain-containing protein.	0.818
D5G408_TUBMM	D5GEJ1_TUBMM	D5G408	D5GEJ1	Uncharacterized protein.	Uncharacterized protein.	0.805
D5G408_TUBMM	D5GEX5_TUBMM	D5G408	D5GEX5	Uncharacterized protein.	AAA domain-containing protein.	0.558
D5G408_TUBMM	D5GG29_TUBMM	D5G408	D5GG29	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.917
D5G408_TUBMM	D5GK37_TUBMM	D5G408	D5GK37	Uncharacterized protein.	Uncharacterized protein.	0.512
D5G408_TUBMM	D5GLE5_TUBMM	D5G408	D5GLE5	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.991
D5G408_TUBMM	D5GLX3_TUBMM	D5G408	D5GLX3	Uncharacterized protein.	RING-type domain-containing protein.	0.462
D5G408_TUBMM	D5GNF4_TUBMM	D5G408	D5GNF4	Uncharacterized protein.	TGc domain-containing protein.	0.792
D5G408_TUBMM	D5GP55_TUBMM	D5G408	D5GP55	Uncharacterized protein.	Uncharacterized protein.	0.956
D5G408_TUBMM	D5GPN6_TUBMM	D5G408	D5GPN6	Uncharacterized protein.	UBX domain-containing protein.	0.430
D5G424_TUBMM	D5G4P0_TUBMM	D5G424	D5G4P0	U-box domain-containing protein.	Uncharacterized protein.	0.719
D5G424_TUBMM	D5G4R8_TUBMM	D5G424	D5G4R8	U-box domain-containing protein.	bVLRF1 domain-containing protein.	0.614
D5G424_TUBMM	D5G597_TUBMM	D5G424	D5G597	U-box domain-containing protein.	UBX domain-containing protein.	0.877