(10 nodes) Mixed, incl. UBX domain, and VCP-NPL4-UFD1 AAA ATPase complex network (Tuber melanosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D5G424_TUBMM	U-box domain-containing protein. (1072 aa)
	D5G4P0_TUBMM	Uncharacterized protein. (751 aa)
	D5G5L9_TUBMM	UBX domain-containing protein. (532 aa)
	D5G663_TUBMM	AAA domain-containing protein. (986 aa)
	D5GDU7_TUBMM	OTU domain-containing protein. (326 aa)
	D5GJ23_TUBMM	MPN domain-containing protein. (675 aa)
	D5GK37_TUBMM	Uncharacterized protein. (367 aa)
	D5GLE5_TUBMM	Uncharacterized protein; Belongs to the AAA ATPase family. (818 aa)
	D5GP55_TUBMM	Uncharacterized protein. (391 aa)
	D5GPN6_TUBMM	UBX domain-containing protein. (501 aa)

Your Current Organism:

Tuber melanosporum

NCBI taxonomy Id: 656061
Other names: T. melanosporum Mel28, Tuber melanosporum Mel28

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D5G424_TUBMM	D5G4P0_TUBMM	D5G424	D5G4P0	U-box domain-containing protein.	Uncharacterized protein.	0.719
D5G424_TUBMM	D5G663_TUBMM	D5G424	D5G663	U-box domain-containing protein.	AAA domain-containing protein.	0.703
D5G424_TUBMM	D5GDU7_TUBMM	D5G424	D5GDU7	U-box domain-containing protein.	OTU domain-containing protein.	0.971
D5G424_TUBMM	D5GJ23_TUBMM	D5G424	D5GJ23	U-box domain-containing protein.	MPN domain-containing protein.	0.975
D5G424_TUBMM	D5GK37_TUBMM	D5G424	D5GK37	U-box domain-containing protein.	Uncharacterized protein.	0.978
D5G424_TUBMM	D5GLE5_TUBMM	D5G424	D5GLE5	U-box domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.980
D5G424_TUBMM	D5GP55_TUBMM	D5G424	D5GP55	U-box domain-containing protein.	Uncharacterized protein.	0.950
D5G424_TUBMM	D5GPN6_TUBMM	D5G424	D5GPN6	U-box domain-containing protein.	UBX domain-containing protein.	0.418
D5G4P0_TUBMM	D5G424_TUBMM	D5G4P0	D5G424	Uncharacterized protein.	U-box domain-containing protein.	0.719
D5G4P0_TUBMM	D5G5L9_TUBMM	D5G4P0	D5G5L9	Uncharacterized protein.	UBX domain-containing protein.	0.503
D5G4P0_TUBMM	D5G663_TUBMM	D5G4P0	D5G663	Uncharacterized protein.	AAA domain-containing protein.	0.707
D5G4P0_TUBMM	D5GDU7_TUBMM	D5G4P0	D5GDU7	Uncharacterized protein.	OTU domain-containing protein.	0.981
D5G4P0_TUBMM	D5GJ23_TUBMM	D5G4P0	D5GJ23	Uncharacterized protein.	MPN domain-containing protein.	0.982
D5G4P0_TUBMM	D5GK37_TUBMM	D5G4P0	D5GK37	Uncharacterized protein.	Uncharacterized protein.	0.982
D5G4P0_TUBMM	D5GLE5_TUBMM	D5G4P0	D5GLE5	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.982
D5G4P0_TUBMM	D5GP55_TUBMM	D5G4P0	D5GP55	Uncharacterized protein.	Uncharacterized protein.	0.979
D5G4P0_TUBMM	D5GPN6_TUBMM	D5G4P0	D5GPN6	Uncharacterized protein.	UBX domain-containing protein.	0.618
D5G5L9_TUBMM	D5G4P0_TUBMM	D5G5L9	D5G4P0	UBX domain-containing protein.	Uncharacterized protein.	0.503
D5G5L9_TUBMM	D5G663_TUBMM	D5G5L9	D5G663	UBX domain-containing protein.	AAA domain-containing protein.	0.812
D5G5L9_TUBMM	D5GJ23_TUBMM	D5G5L9	D5GJ23	UBX domain-containing protein.	MPN domain-containing protein.	0.998